Disease: Adult Glioblastoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs3024994
VEGFA
0.776 0.120 6 43775770 non coding transcript exon variant C/T snv 3.8E-02 8
rs3092993
ATM ; C11orf65
0.827 0.040 11 108364388 intron variant C/A snv 0.11 5
rs374524467
PITX2
0.827 0.040 4 110632961 missense variant A/C snv 8.0E-06 7.0E-06 5
rs4295627
CCDC26
0.763 0.200 8 129673211 intron variant T/G snv 0.17 11
rs4977756
CDKN2B-AS1
0.683 0.440 9 22068653 intron variant G/A snv 0.64 24
rs498872
PHLDB1
0.776 0.240 11 118606652 5 prime UTR variant A/G;T snv 10
rs55819519
TP53
0.627 0.400 17 7673751 missense variant C/A;G;T snv 1.6E-04 1.3E-04 40
rs6010620
RTEL1 ; RTEL1-TNFRSF6B
0.701 0.360 20 63678486 intron variant A/C;G snv 21
rs753152604
CDK4
0.827 0.040 12 57751680 missense variant C/A snv 7
rs833061
VEGFA
0.605 0.600 6 43769749 upstream gene variant C/G;T snv 42
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs865880036
MEIS2
0.827 0.040 15 37098156 missense variant A/C snv 1.3E-04 5
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 214