DisGeNET - a database of gene-disease associations

List of associated variants

Glioma, C0017638

Source: GWASCAT ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs3851634	POLR3B	0.882	0.040	12	106419124	intron variant	T/C	snv		0.22	4
rs12752552	RAVER2	0.882	0.040	1	64763616	intron variant	T/C	snv		0.13	4
rs2562152	RHBDF1	0.882	0.040	16	73898	intron variant	A/T	snv		0.67	4
rs2297440	RTEL1 ; RTEL1-TNFRSF6B	0.763	0.080	20	63680946	intron variant	T/C	snv		0.81	4
rs2235573	SLC16A8	0.882	0.040	22	38081923	synonymous variant	G/A	snv	0.47	0.46	4
rs2853676	TERT	0.667	0.560	5	1288432	intron variant	T/A;C	snv			4
rs1412829	CDKN2B-AS1	0.742	0.400	9	22043927	intron variant	A/G	snv		0.28	3
rs2151280	CDKN2B-AS1	0.701	0.360	9	22034720	non coding transcript exon variant	G/A	snv		0.46	3
rs2157719	CDKN2B-AS1	0.708	0.360	9	22033367	non coding transcript exon variant	C/T	snv		0.71	3
rs4977574	CDKN2B-AS1	0.695	0.520	9	22098575	intron variant	A/G;T	snv			3
rs1063192	CDKN2B ; CDKN2B-AS1	0.695	0.520	9	22003368	3 prime UTR variant	G/A;T	snv			3
rs2235544	DIO1	0.742	0.240	1	53909897	intron variant	C/A;T	snv	0.53; 4.0E-06		3
rs6010620	RTEL1 ; RTEL1-TNFRSF6B	0.701	0.360	20	63678486	intron variant	A/C;G	snv			3
rs6062302	RTEL1 ; RTEL1-TNFRSF6B	0.882	0.040	20	63689615	synonymous variant	T/C	snv	0.74	0.81	3
rs2252586		0.882	0.040	7	54911231	intergenic variant	C/T	snv		0.27	2
rs4635969		0.827	0.160	5	1308437	downstream gene variant	G/A;T	snv			2
rs10131032	AKAP6	1.000	0.040	14	32780875	intron variant	G/A	snv		9.3E-02	2
rs12076373	AKT3	1.000	0.040	1	243688645	intron variant	G/C	snv		0.20	2
rs7572263	C2orf80	1.000	0.040	2	208186862	intron variant	A/G	snv		0.27	2
rs4295627	CCDC26	0.763	0.200	8	129673211	intron variant	T/G	snv		0.17	2
rs891835	CCDC26	0.851	0.120	8	129479506	intron variant	T/G	snv		0.17	2
rs145929329	CDKN2B-AS1	0.882	0.040	9	22066213	intron variant	TTTT/-;T;TT;TTT;TTTTT;TTTTTT;TTTTTTTTTT	delins		0.58	2
rs3791675	EFEMP1	1.000	0.040	2	55884174	intron variant	C/T	snv		0.20	2
rs1801591	ETFA	0.882	0.040	15	76286421	missense variant	G/A	snv	7.4E-02	6.4E-02	2
rs77633900	ETFA	1.000	0.040	15	76246118	intron variant	G/C	snv		6.3E-02	2