Disease: Breast Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2075685
TMEM167A ; XRCC4
0.724 0.320 5 83076846 intron variant G/A;T snv 14
rs2279115
BCL2
0.724 0.320 18 63319604 5 prime UTR variant G/A;T snv 18
rs371074389
LOC112268426 ; CXCR4
0.732 0.320 2 136115226 synonymous variant C/T snv 4.0E-06 4.2E-05 16
rs3749474
TMEM165 ; CLOCK
0.724 0.320 4 55434518 3 prime UTR variant C/T snv 0.33 17
rs4246215
FADS2 ; FEN1
0.677 0.320 11 61796827 3 prime UTR variant G/C;T snv 29
rs7581886
NPAS2
0.708 0.320 2 100964784 intron variant C/T snv 0.92 18
rs766914563
LOC112268426 ; CXCR4
0.732 0.320 2 136115082 synonymous variant C/T snv 7.0E-06 16
rs781172058
CXCR4
0.732 0.320 2 136115340 synonymous variant C/T snv 4.0E-06 16
rs895520
NPAS2
0.689 0.320 2 100961475 intron variant G/A snv 0.35 23
rs78378222
TP53
0.662 0.360 17 7668434 3 prime UTR variant T/G snv 8.3E-03 37
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs55819519
TP53
0.627 0.400 17 7673751 missense variant C/A;G;T snv 1.6E-04 1.3E-04 40
rs1346044
WRN
0.708 0.440 8 31167138 missense variant T/C snv 0.24 0.23 23
rs1045485
CASP8
0.637 0.480 2 201284866 missense variant G/A;C;T snv 4.0E-06; 9.0E-02 34
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs12917
MGMT ; LOC105378560
0.605 0.480 10 129708019 missense variant C/T snv 0.14 0.14 45
rs1805377
XRCC4
0.689 0.480 5 83353124 splice acceptor variant G/A snv 0.23 0.25 19
rs2308321
MGMT
0.653 0.480 10 129766800 missense variant A/G snv 9.3E-02 8.7E-02 29
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs4977574
CDKN2B-AS1
0.695 0.520 9 22098575 intron variant A/G;T snv 26
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs17655
BIVM-ERCC5 ; ERCC5
0.597 0.560 13 102875652 missense variant G/C snv 0.28 0.30 52
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs2853676
TERT
0.667 0.560 5 1288432 intron variant T/A;C snv 29