Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2066845
NOD2
0.611 0.600 16 50722629 missense variant G/C;T snv 1.1E-02; 2.2E-04 46
rs1979277
SHMT1
0.620 0.560 17 18328782 missense variant G/A snv 0.27 0.31 45
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs1800925
IL13 ; TH2LCRR
0.627 0.560 5 132657117 non coding transcript exon variant C/G;T snv 37
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs4444903
EGF
0.630 0.360 4 109912954 5 prime UTR variant A/G snv 0.51 35
rs28934571
TP53
0.645 0.360 17 7674216 missense variant C/A;G snv 31
rs568408
IL12A ; IL12A-AS1
0.649 0.600 3 159995680 3 prime UTR variant G/A snv 0.16 29
rs2070874
IL4
0.672 0.560 5 132674018 5 prime UTR variant C/T snv 0.28 0.28 27
rs2230926
TNFAIP3
0.662 0.440 6 137874929 missense variant T/C;G snv 4.0E-06; 5.4E-02 27
rs3783553
IL1A
0.667 0.480 2 112774138 3 prime UTR variant -/TGAA delins 26
rs2227982
LOC105373977 ; PDCD1
0.677 0.480 2 241851281 missense variant G/A snv 9.2E-02 4.3E-02 24
rs11134527
MIR218-2 ; SLIT3
0.677 0.400 5 168768351 intron variant G/A snv 0.25 24
rs12980275 0.701 0.360 19 39241143 upstream gene variant A/G snv 0.36 23
rs333
CCR5 ; CCR5AS
0.667 0.520 3 46373453 frameshift variant GTCAGTATCAATTCTGGAAGAATTTCCAGACA/- delins 7.3E-02 23
rs12252
IFITM3
0.695 0.240 11 320772 splice region variant A/G snv 0.13 0.13 23
rs3782886
BRAP
0.724 0.480 12 111672685 synonymous variant T/C snv 1.9E-02 5.9E-03 22
rs1805015
IL4R
0.683 0.520 16 27362859 missense variant T/C snv 0.16 0.22 22
rs8193036
IL17A
0.689 0.600 6 52185695 upstream gene variant C/T snv 0.72 21
rs10204525
PDCD1
0.701 0.440 2 241850169 3 prime UTR variant C/T snv 0.21 20
rs1805377
XRCC4
0.689 0.480 5 83353124 splice acceptor variant G/A snv 0.23 0.25 19
rs3761549
FOXP3
0.724 0.480 X 49260888 intron variant G/A snv 9.6E-02 18
rs2596542
MICA-AS1 ; MICA
0.724 0.200 6 31398818 upstream gene variant C/T snv 0.41 18
rs9808753
IFNGR2
0.701 0.400 21 33415005 missense variant A/G snv 0.20 0.18 17