DisGeNET - a database of gene-disease associations

List of associated variants

Hepatitis C, C0019196

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv		213
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv		121
rs1800872	IL19 ; IL10	0.495	0.840	1	206773062	5 prime UTR variant	T/G	snv	0.69	119
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv	0.41	113
rs1800871	IL19 ; IL10	0.508	0.800	1	206773289	5 prime UTR variant	A/G	snv	0.69	108
rs9939609	FTO	0.559	0.720	16	53786615	intron variant	T/A	snv	0.41	98
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv		93
rs12979860	IFNL4	0.547	0.520	19	39248147	intron variant	C/T	snv	0.39	84
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv		78
rs1800469	B9D2 ; TGFB1	0.547	0.760	19	41354391	intron variant	A/G	snv	0.69	78
rs2234693	ESR1	0.555	0.680	6	151842200	intron variant	T/C	snv	0.47	77
rs1800796	IL6-AS1 ; STEAP1B ; IL6	0.555	0.760	7	22726627	non coding transcript exon variant	G/C	snv	9.9E-02	74
rs3212227	IL12B	0.566	0.840	5	159315942	3 prime UTR variant	T/G	snv	0.26	65
rs4073	CXCL8	0.566	0.800	4	73740307	upstream gene variant	A/T	snv	0.46	64
rs9340799	ESR1	0.583	0.680	6	151842246	intron variant	A/G	snv	0.32	62
rs8099917		0.581	0.600	19	39252525	upstream gene variant	T/G	snv	0.16	60
rs7574865	STAT4	0.574	0.720	2	191099907	intron variant	T/G	snv	0.79	59
rs28362491	LOC105377621 ; NFKB1	0.592	0.720	4	102500998	non coding transcript exon variant	ATTG/-	delins		56
rs2430561	IFNG ; IFNG-AS1	0.590	0.760	12	68158742	intron variant	T/A	snv	0.36	50
rs187238	IL18	0.602	0.680	11	112164265	intron variant	C/A;G	snv		48
rs1799724	LTA ; TNF	0.600	0.680	6	31574705	upstream gene variant	C/T	snv	8.5E-02	47
rs1946518	IL18	0.602	0.760	11	112164735	intron variant	T/G	snv	0.60	46
rs3087243	CTLA4	0.623	0.720	2	203874196	downstream gene variant	G/A	snv	0.37	44
rs1800797	IL6 ; IL6-AS1 ; STEAP1B	0.605	0.800	7	22726602	non coding transcript exon variant	A/G	snv	0.72	43