DisGeNET - a database of gene-disease associations

List of associated variants

Hepatitis C, C0019196

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1012068	DEPDC5	0.827	0.160	22	31869917	intron variant	T/G	snv		0.37	5
rs1013151	TLR8-AS1 ; TLR8	1.000	0.080	X	12914412	intron variant	C/T	snv		0.51	1
rs10204525	PDCD1	0.701	0.440	2	241850169	3 prime UTR variant	C/T	snv		0.21	20
rs1029153	CXCL12	1.000	0.080	10	44371698	3 prime UTR variant	A/G	snv		0.27	1
rs10336	LOC101928809 ; CXCL9	0.851	0.240	4	76001835	3 prime UTR variant	A/G;T	snv			4
rs1034713634	VIPR1	1.000	0.080	3	42536097	missense variant	C/A;T	snv			1
rs1042034	APOB	0.851	0.240	2	21002409	missense variant	C/T	snv	0.70	0.78	15
rs1042522	TP53	0.426	0.800	17	7676154	missense variant	G/C;T	snv	0.67		242
rs1049606	CCND2-AS1 ; CCND2	0.851	0.160	12	4273870	5 prime UTR variant	C/T	snv		0.58	4
rs1049807	LOC101927369 ; CCL4	1.000	0.080	17	36105270	missense variant	A/G	snv	0.22	0.21	1
rs1051792	MICA	0.851	0.240	6	31411200	missense variant	G/A	snv	0.34	0.35	5
rs1052020291	CTSB	1.000	0.080	8	11848075	missense variant	G/C	snv		7.0E-06	1
rs1052133	OGG1 ; CAMK1	0.476	0.800	3	9757089	missense variant	C/G	snv	0.27	0.22	147
rs1063340	CCL3 ; LOC102724850	1.000	0.080	17	36088417	3 prime UTR variant	G/C;T	snv			1
rs1063478	HLA-DMB ; HLA-DMA	1.000	0.080	6	32949767	missense variant	C/T	snv	0.15	0.13	1
rs1063499	C7	0.925	0.120	5	40955459	missense variant	G/C	snv	0.58	0.52	2
rs10735810	VDR	0.662	0.640	12	47879112	start lost	A/C;G;T	snv			26
rs10741657	CYP2R1	0.637	0.520	11	14893332	upstream gene variant	A/G	snv		0.65	34
rs10766197	CYP2R1	0.807	0.240	11	14900334	upstream gene variant	G/A;C	snv			6
rs10774671	OAS1	0.732	0.480	12	112919388	splice acceptor variant	G/A;C	snv	0.67		14
rs10814325	RECK	0.827	0.200	9	36036597	upstream gene variant	T/A;C;G	snv			7
rs10833	IL15	0.776	0.160	4	141733394	3 prime UTR variant	T/A;C	snv			10
rs10853728		0.851	0.160	19	39254506	downstream gene variant	C/A;G;T	snv			5
rs10877012	CYP27B1 ; METTL1	0.763	0.280	12	57768302	intron variant	G/C;T	snv			10
rs10903035	IFNLR1	1.000	0.080	1	24155450	3 prime UTR variant	G/A	snv		0.63	2