DisGeNET - a database of gene-disease associations

List of shared variants

Hypertensive disease, C0020538

Disease: Diabetes Mellitus, Non-Insulin-Dependent

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs1801133	MTHFR	0.472	0.880	1	11796321	missense variant	G/A	snv	0.31	0.27	174
rs9651118	MTHFR	0.683	0.480	1	11802157	intron variant	T/C	snv		0.18	20
rs5068	NPPA ; NPPA-AS1 ; CLCN6	0.776	0.160	1	11845917	3 prime UTR variant	A/G;T	snv			13
rs5065	NPPA ; CLCN6 ; NPPA-AS1	0.763	0.240	1	11846011	stop lost	A/G	snv	0.14	0.21	12
rs198389	NPPB	0.776	0.240	1	11859214	upstream gene variant	A/G	snv		0.39	10
rs1799883	FABP2	0.658	0.440	4	119320747	missense variant	T/A;C;G	snv	0.73		36
rs2393791	HNF1A	0.925	0.160	12	120986153	intron variant	C/T	snv		0.62	8
rs7310409	HNF1A	0.925	0.160	12	120987058	intron variant	A/C;G;T	snv			7
rs137853240	HNF1A	0.807	0.080	12	120994405	missense variant	G/A	snv		1.4E-05	8
rs2259820	HNF1A	0.882	0.160	12	120997539	synonymous variant	C/T	snv	0.34	0.26	6
rs2464196	HNF1A	0.742	0.320	12	120997624	missense variant	G/A	snv	0.34	0.27	17
rs74421874	PSMD9	0.776	0.360	12	121902546	non coding transcript exon variant	G/A	snv		0.24	14
rs3825172	PSMD9	0.776	0.360	12	121902569	non coding transcript exon variant	C/G;T	snv			14
rs1043307	PSMD9	0.776	0.360	12	121915890	missense variant	A/C;G	snv			14
rs5370	EDN1	0.630	0.520	6	12296022	missense variant	G/T	snv	0.23	0.21	37
rs9817428	PPARG	0.925	0.120	3	12298768	intron variant	C/A	snv		0.31	3
rs1801282	PPARG	0.500	0.840	3	12351626	missense variant	C/G	snv	0.11	8.9E-02	131
rs1805192	PPARG	0.510	0.840	3	12379739	missense variant	C/G	snv			121
rs3856806	PPARG	0.637	0.440	3	12434058	synonymous variant	C/T	snv	0.13	0.11	41
rs121909244	PPARG	0.776	0.160	3	12434111	missense variant	C/A;T	snv	4.0E-06		11
rs9838915	KLF15	0.882	0.120	3	126347377	intron variant	G/A	snv		0.19	4
rs7799039	LOC105375494	0.649	0.560	7	128238730	upstream gene variant	G/A;C	snv			33
rs200487063	LEP	0.851	0.200	7	128241246	upstream gene variant	G/A	snv		2.1E-05	5
rs34104384	LEP	0.851	0.200	7	128241254	upstream gene variant	A/T	snv		8.2E-03	5