Disease: Rheumatoid Arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs549591993
F7
0.776 0.400 13 113105794 5 prime UTR variant C/A snv 4.0E-04 2.8E-05 12
rs367732974
F7
0.790 0.360 13 113105788 5 prime UTR variant G/A snv 8.9E-05 2.8E-05 9
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs2237892
KCNQ1
0.790 0.320 11 2818521 intron variant C/T snv 9.2E-02 16
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs3025039
VEGFA
0.576 0.720 6 43784799 3 prime UTR variant C/T snv 0.13 62
rs1136410
PARP1
0.559 0.760 1 226367601 missense variant A/G snv 0.21 0.15 70
rs3746444
MIR499A ; MIR499B ; MYH7B ; LOC107985393
0.514 0.760 20 34990448 mature miRNA variant A/G snv 0.20 0.19 105
rs243865
MMP2
0.600 0.640 16 55477894 intron variant C/T snv 0.19 48
rs1870377
KDR
0.695 0.520 4 55106807 missense variant T/A snv 0.22 0.20 25
rs204994
PBX2
0.925 0.120 6 32187221 non coding transcript exon variant C/T snv 0.18 0.21 4
rs1805087
MTR
0.496 0.800 1 236885200 missense variant A/G snv 0.20 0.21 135
rs2282679
GC
0.645 0.480 4 71742666 intron variant T/G snv 0.21 38
rs1801131
MTHFR
0.535 0.840 1 11794419 missense variant T/G snv 0.29 0.26 93
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs729302 0.827 0.160 7 128928906 intergenic variant A/C snv 0.28 6
rs2779249
NOS2
0.851 0.200 17 27801555 intron variant C/A snv 0.33 7
rs11614913
HOXC6 ; MIR196A2
0.512 0.760 12 53991815 mature miRNA variant C/T snv 0.39 0.34 111
rs5498
ICAM4 ; ICAM1
0.531 0.760 19 10285007 missense variant A/G snv 0.44 0.37 99
rs4728142 0.732 0.320 7 128933913 upstream gene variant G/A snv 0.38 18
rs6313
HTR2A
0.562 0.640 13 46895805 synonymous variant G/A snv 0.41 0.40 82
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157