Disease: Autoimmune Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs113488022
BRAF
0.351 0.840 7 140753336 missense variant A/C;G;T snv 4.0E-06 490
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs3087243
CTLA4
0.623 0.720 2 203874196 downstream gene variant G/A snv 0.37 44
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs34536443
TYK2
0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 25
rs225014
DIO2
0.695 0.400 14 80203237 missense variant T/C snv 0.41 0.39 22
rs4409785 0.752 0.240 11 95578258 intron variant T/C snv 0.13 12
rs10748781 0.763 0.160 10 99523573 upstream gene variant C/A;G snv 11
rs76428106
FLT3
0.851 0.040 13 28029870 intron variant T/C;G snv 10
rs1443438
PTCSC2
0.827 0.080 9 97787746 intron variant T/A;C snv 8
rs60600003
ELMO1
0.827 0.120 7 37342861 intron variant T/C;G snv 7
rs71508903
ARID5B
0.807 0.160 10 62020112 intron variant C/T snv 0.15 7
rs78534766
ADCY7
0.827 0.080 16 50301163 missense variant C/A snv 4.3E-03 3.6E-03 7
rs3807307
IRF5
0.827 0.120 7 128939148 intron variant T/C snv 0.41 6
rs1032129
TNFRSF11B
0.851 0.040 8 118939661 intron variant A/C snv 0.37 5
rs11073337
RASGRP1
0.851 0.040 15 38555562 intron variant A/C snv 0.27 5
rs114378220
CAMK4
0.851 0.040 5 111230662 intron variant C/T snv 4.5E-02 5
rs114558062 0.851 0.040 3 187923342 intergenic variant T/C snv 6.6E-03 5
rs11675342
TPO
0.851 0.040 2 1403856 intron variant C/T snv 0.40 5
rs12482947
UBASH3A
0.851 0.040 21 42431928 intron variant T/C snv 0.57 5
rs1534430
MIR3681HG
0.851 0.040 2 12504610 intron variant C/T snv 0.35 5
rs55984493 0.851 0.040 13 99118074 intergenic variant A/T snv 0.15 5