Disease: Lupus Erythematosus, Systemic
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1457092
MYO9B
0.790 0.320 19 17193427 intron variant C/A snv 0.44 8
rs1517352
STAT4
0.851 0.160 2 191066738 intron variant A/C snv 0.45 5
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs2187668
LOC107986589 ; HLA-DQA2 ; HLA-DQA1
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 20
rs2430561
IFNG ; IFNG-AS1
0.590 0.760 12 68158742 intron variant T/A snv 0.36 50
rs3024493
IL19 ; IL10
0.776 0.280 1 206770623 intron variant C/A;T snv 0.11 9
rs352139
TLR9
0.732 0.320 3 52224356 intron variant T/C snv 0.51 0.54 18
rs4676410
GPR35
0.716 0.240 2 240624322 intron variant G/A snv 0.26 17
rs5743836
TLR9
0.658 0.440 3 52226766 intron variant A/G snv 0.20 31
rs6478108
TNFSF15
0.763 0.200 9 114796423 intron variant C/T snv 0.73 10
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs6920220 0.742 0.440 6 137685367 intron variant G/A snv 0.16 14
rs7517847
IL23R ; C1orf141
0.689 0.600 1 67215986 intron variant T/G snv 0.37 19
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs7808907
IRF5
1.000 0.080 7 128944030 intron variant T/C snv 0.49 2
rs7975232
VDR
0.576 0.760 12 47845054 intron variant C/A snv 0.51 0.55 56
rs9271366 0.807 0.240 6 32619077 intergenic variant G/A snv 0.86 9
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 17
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1051792
MICA
0.851 0.240 6 31411200 missense variant G/A snv 0.34 0.35 5
rs1127354
ITPA
0.667 0.400 20 3213196 missense variant C/A;G snv 7.5E-02 26
rs1188383936
F2
0.524 0.760 11 46725976 missense variant C/T snv 8.0E-06 102
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs121917864
TLR2
0.645 0.520 4 153704936 missense variant C/T snv 8.8E-05 9.8E-05 31
rs12720356
TYK2
0.752 0.360 19 10359299 missense variant A/C;G snv 6.1E-02; 4.0E-06 12