DisGeNET - a database of gene-disease associations

List of associated variants

Kidney Failure, Chronic, C0022661

Source: GWASCAT ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	55
rs1047891	CPS1	0.827	0.200	2	210675783	missense variant	C/A	snv	0.30	0.33	25
rs653178	ATXN2	0.672	0.600	12	111569952	intron variant	C/T	snv		0.67	23
rs1535	FADS2	0.752	0.240	11	61830500	intron variant	A/G	snv		0.31	18
rs174533	MYRF ; TMEM258	0.763	0.160	11	61781553	intron variant	G/A	snv	0.37	0.29	17
rs7903146	TCF7L2	0.554	0.680	10	112998590	intron variant	C/G;T	snv			16
rs174537	TMEM258 ; MYRF	0.708	0.400	11	61785208	non coding transcript exon variant	G/T	snv		0.28	14
rs174594	FADS2	0.776	0.160	11	61852357	intron variant	C/A;T	snv			13
rs12509595		1.000	0.080	4	80261400	intergenic variant	T/C	snv		0.23	10
rs1800469	B9D2 ; TGFB1	0.547	0.760	19	41354391	intron variant	A/G	snv		0.69	10
rs603424	PKD2L1	1.000	0.080	10	100315722	intron variant	G/A	snv		0.34	10
rs102275	TMEM258	0.827	0.320	11	61790331	non coding transcript exon variant	T/C	snv		0.47	10
rs174548	FADS2 ; FADS1	0.851	0.160	11	61803876	5 prime UTR variant	C/G;T	snv			9
rs174549	FADS2 ; FADS1	0.851	0.240	11	61803910	5 prime UTR variant	G/A	snv		0.26	8
rs963837	LOC101928338 ; LINC02859	0.925	0.120	11	30727543	intergenic variant	T/C	snv		0.35	8
rs9895661	BCAS3	0.882	0.200	17	61379228	non coding transcript exon variant	C/T	snv		0.69	7
rs3087243	CTLA4	0.623	0.720	2	203874196	downstream gene variant	G/A	snv		0.37	7
rs174566	FADS1 ; FADS2	0.925	0.160	11	61824890	intron variant	A/G	snv		0.34	7
rs174583	FADS2	0.807	0.320	11	61842278	intron variant	C/T	snv		0.35	7
rs11622435	LOC101928462	0.827	0.120	14	81151652	intron variant	G/A	snv		4.7E-02	7
rs77924615	PDILT	1.000	0.080	16	20381010	intron variant	G/A	snv		0.16	7
rs2070600	AGER	0.561	0.760	6	32183666	missense variant	C/T	snv	5.3E-02	3.6E-02	6
rs174554	FADS1 ; FADS2	1.000	0.080	11	61811991	intron variant	A/G	snv	0.40	0.28	6
rs7740107	L3MBTL3	1.000	0.080	6	130053316	intron variant	T/A;G	snv			6
rs3925584	LOC101928338	1.000	0.080	11	30738788	intergenic variant	T/C	snv		0.35	6