DisGeNET - a database of gene-disease associations

List of shared variants

Acute lymphocytic leukemia, C0023449

Disease: Childhood Acute Lymphoblastic Leukemia

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs35134728	C1orf167 ; MTHFR	0.882	0.120	1	11787277	3 prime UTR variant	-/AGA	delins			3
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins			214
rs1169704167	ATM	0.882	0.120	11	108284370	frameshift variant	-/T	delins	8.0E-06		3
rs587781823	ATM	0.851	0.280	11	108284370	frameshift variant	-/T	delins			5
rs1051296	SLC19A1	0.882	0.120	21	45514947	3 prime UTR variant	A/C	snv	0.43	0.44	3
rs10519612	IL15	0.882	0.120	4	141732548	intron variant	A/C	snv		0.10	3
rs1057519743	CRLF2	0.827	0.120	Y	1196852	missense variant	A/C	snv			6
rs111033563	LOC108783645 ; HFE	0.776	0.240	6	26092916	missense variant	A/C	snv	4.0E-06		8
rs2069762	IL2	0.672	0.560	4	122456825	upstream gene variant	A/C	snv		0.24	23
rs17069665	FOXO3	0.882	0.120	6	108620265	intron variant	A/C;G	snv			4
rs104893636	HOXD4 ; HOXD3	0.882	0.120	2	176151875	missense variant	A/C;T	snv	5.2E-06; 7.9E-04		3
rs17855750	IL27	0.695	0.480	16	28503907	missense variant	A/C;T	snv	6.4E-02; 4.0E-06		21
rs2032582	ABCB1	0.538	0.800	7	87531302	missense variant	A/C;T	snv	0.54; 3.8E-02		97
rs3731217	CDKN2A	0.763	0.320	9	21984662	intron variant	A/C;T	snv			10
rs1039659576	MTR	0.689	0.520	1	236803473	missense variant	A/G	snv			21
rs10994982	ARID5B	0.790	0.120	10	61950345	intron variant	A/G	snv		0.49	7
rs11978267	IKZF1	0.763	0.240	7	50398606	intron variant	A/G	snv		0.25	9
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs1296957097	CHEK2	0.882	0.120	22	28719401	missense variant	A/G	snv			3
rs138047632	LOC107987304 ; SLC19A1	0.882	0.120	21	45525860	missense variant	A/G	snv	2.4E-03	2.2E-03	3
rs1695	GSTP1	0.457	0.880	11	67585218	missense variant	A/G	snv	0.34	0.36	188
rs1801265	DPYD	0.763	0.280	1	97883329	missense variant	A/G	snv		0.28	13
rs1801394	FASTKD3 ; MTRR	0.531	0.840	5	7870860	missense variant	A/G	snv	0.47	0.45	101
rs1805087	MTR	0.496	0.800	1	236885200	missense variant	A/G	snv	0.20	0.21	135
rs1966862	ARHGAP24	0.790	0.120	4	85766908	intron variant	A/G	snv		0.14	8