Disease: Childhood Acute Lymphoblastic Leukemia
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs724159947
ETV6
0.851 0.120 12 11869601 missense variant C/T snv 6
rs786205155
ETV6
0.882 0.120 12 11884481 missense variant T/C snv 4
rs1573613
ETV6
0.882 0.120 12 11894684 3 prime UTR variant T/C snv 0.48 3
rs757874631
CBL
0.882 0.120 11 119278211 missense variant T/A;C snv 4
rs1057519743
CRLF2
0.827 0.120 Y 1196852 missense variant A/C snv 6
rs2069762
IL2
0.672 0.560 4 122456825 upstream gene variant A/C snv 0.24 23
rs7039798
FPGS
0.882 0.120 9 127794947 intron variant G/A;C snv 3
rs1544105
FPGS
0.851 0.200 9 127800446 intron variant C/T snv 0.48 4
rs10106
FPGS
0.851 0.200 9 127813796 3 prime UTR variant T/C snv 0.45 4
rs121913459
ABL1
0.672 0.160 9 130872896 missense variant C/T snv 25
rs62571442
MIR3689F ; LOC101448202 ; MIR3689E ; MIR3689D1 ; MIR3689D2 ; MIR3689C ; MIR3689B ; MIR3689A
0.882 0.120 9 134850278 non coding transcript exon variant G/A;C;T snv 0.58; 4.4E-03 3
rs10519612
IL15
0.882 0.120 4 141732548 intron variant A/C snv 0.10 3
rs17007695 0.851 0.120 4 141788570 intergenic variant T/C snv 7.7E-02 4
rs72481843
NR3C1
0.882 0.120 5 143300685 splice donor variant C/G snv 3
rs1427331568
NR3C1
0.882 0.120 5 143314010 missense variant G/C snv 3
rs56149945
NR3C1
0.595 0.680 5 143399752 missense variant T/A;C snv 2.0E-02 49
rs768315648
NR3C1
0.882 0.120 5 143399830 missense variant T/C snv 1.2E-05 3
rs1361742125
NR3C1
0.882 0.120 5 143399842 missense variant T/C snv 4.0E-06 7.0E-06 3
rs1194008138
NR3C1
0.882 0.120 5 143400121 missense variant T/C snv 4.0E-06 3
rs1412792500
NR3C1
0.882 0.120 5 143400541 missense variant T/C snv 4.0E-06 1.4E-05 3
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs57095329
MIR3142HG
0.677 0.480 5 160467840 intron variant A/G snv 7.8E-02 25
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs414580
MSR1
0.882 0.120 8 16177793 intron variant T/A;C snv 3
rs104893636
HOXD4 ; HOXD3
0.882 0.120 2 176151875 missense variant A/C;T snv 5.2E-06; 7.9E-04 3