Disease: Non-alcoholic Fatty Liver Disease
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs1799945
LOC108783645 ; HFE
0.452 0.760 6 26090951 missense variant C/G;T snv 0.11 0.10 226
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs2275913
IL17A
0.514 0.760 6 52186235 upstream gene variant G/A snv 0.28 105
rs738409
PNPLA3
0.557 0.720 22 43928847 missense variant C/G snv 0.28 0.22 88
rs12979860
IFNL4
0.547 0.520 19 39248147 intron variant C/T snv 0.39 84
rs8099917 0.581 0.600 19 39252525 upstream gene variant T/G snv 0.16 60
rs58542926
TM6SF2
0.630 0.440 19 19268740 missense variant C/T snv 6.5E-02 5.8E-02 42
rs17107315
SPINK1
0.620 0.440 5 147828115 missense variant T/C snv 9.1E-03 8.2E-03 40
rs1800730
HFE ; LOC108783645
0.649 0.480 6 26090957 missense variant A/T snv 1.0E-02 1.0E-02 32
rs1275561861
HLA-A
0.672 0.360 6 29944350 missense variant G/A snv 23
rs12980275 0.701 0.360 19 39241143 upstream gene variant A/G snv 0.36 23
rs641738
LOC112268246 ; TMC4 ; MBOAT7
0.689 0.320 19 54173068 missense variant T/A;C;G snv 22
rs2241883
FABP1
0.763 0.360 2 88124547 missense variant T/C snv 0.30 0.29 14
rs72613567
HSD17B13
0.742 0.320 4 87310240 splice donor variant -/A delins 0.22 14
rs236918
PCSK7
0.776 0.160 11 117220893 non coding transcript exon variant G/A;C snv 10
rs2896019
PNPLA3
0.790 0.160 22 43937814 intron variant T/G snv 0.20 10
rs4374383
MERTK
0.776 0.200 2 112013193 intron variant A/G snv 0.58 10
rs6834314 0.807 0.160 4 87292656 intergenic variant A/G snv 0.24 10
rs2645424
FDFT1
0.827 0.120 8 11826954 intron variant A/C;G snv 0.56 5
rs1227756
COL13A1
0.925 0.080 10 69828748 intron variant G/A;C snv 2