Disease: Primary Sjögren's syndrome
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs2004640
IRF5
0.662 0.520 7 128938247 splice donor variant T/G snv 0.52 26
rs2736340 0.683 0.480 8 11486464 upstream gene variant C/T snv 0.25 22
rs1143679
ITGAM
0.732 0.520 16 31265490 missense variant G/A snv 9.7E-02 0.11 14
rs2205960
TNFSF4
0.763 0.400 1 173222336 intergenic variant G/A;T snv 9
rs12583006
TNFSF13B
0.807 0.320 13 108285104 intron variant T/A snv 0.21 8
rs2070197
IRF5
0.827 0.280 7 128948946 3 prime UTR variant T/C snv 9.0E-02 6