DisGeNET - a database of gene-disease associations

List of associated variants

Lymphoma, Follicular, C0024301

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1217691063	MTHFR	0.330	0.920	1	11796309	missense variant	A/G	snv	4.0E-06	7.0E-06	614
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv			306
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv		0.41	113
rs172378	C1QA	0.790	0.240	1	22638945	synonymous variant	A/G	snv	0.49	0.51	11
rs12711521	MASP2 ; TARDBP	0.807	0.240	1	11030859	missense variant	C/A	snv	0.74	0.63	7
rs1308699981	FCGR3A	0.807	0.440	1	161543085	missense variant	G/A	snv	4.0E-06		7
rs587776632	BCL10	0.925	0.120	1	85267901	frameshift variant	A/-;AAA	delins			2
rs372411058	FCGR3B	1.000	0.120	1	161626395	synonymous variant	C/T	snv	2.0E-05	4.2E-05	1
rs587776633	BCL10	1.000	0.120	1	85270732	frameshift variant	-/T	delins			1
rs587776634	BCL10	1.000	0.120	1	85267788	frameshift variant	TGCCTACTTCTAGAACA/-	del			1
rs587776635	BCL10	1.000	0.120	1	85267919	frameshift variant	T/-	delins			1
rs587776636	BCL10	1.000	0.120	1	85267930	frameshift variant	-/A	delins			1
rs587776637	BCL10	1.000	0.120	1	85267692	inframe deletion	TCT/-	delins			1
rs10190751	CFLAR-AS1 ; CFLAR	0.882	0.120	2	201141373	splice acceptor variant	G/A	snv	0.18	0.26	4
rs3789068	MIR4435-2HG ; BCL2L11	0.925	0.120	2	111151670	intron variant	A/G	snv		0.41	2
rs387907272	MYD88	0.572	0.520	3	38141150	stop lost	T/C	snv	5.2E-05	7.0E-06	73
rs568408	IL12A ; IL12A-AS1	0.649	0.600	3	159995680	3 prime UTR variant	G/A	snv		0.16	29
rs6444305	LPP	0.925	0.120	3	188582114	intron variant	G/A;C;T	snv			2
rs20541	IL13 ; TH2LCRR	0.585	0.720	5	132660272	missense variant	A/G	snv	0.72	0.77	52
rs1805377	XRCC4	0.689	0.480	5	83353124	splice acceptor variant	G/A	snv	0.23	0.25	19
rs1494555	IL7R	0.790	0.120	5	35871088	missense variant	G/A	snv	0.64	0.72	8
rs1056503	XRCC4	0.851	0.200	5	83353158	synonymous variant	T/A;G	snv	4.0E-06; 0.23		4
rs9275572		0.724	0.360	6	32711222	upstream gene variant	A/G;T	snv			15
rs9268853	HLA-DRB9	0.790	0.440	6	32461866	intron variant	T/C	snv		0.29	10
rs2647012		0.790	0.320	6	32696681	intergenic variant	T/C	snv		0.64	7