Disease: Lymphoma, Non-Hodgkin
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs1695
GSTP1
0.457 0.880 11 67585218 missense variant A/G snv 0.34 0.36 188
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 113
rs731236
VDR
0.542 0.760 12 47844974 synonymous variant A/G snv 0.33 0.34 81
rs387907272
MYD88
0.572 0.520 3 38141150 stop lost T/C snv 5.2E-05 7.0E-06 73
rs20541
IL13 ; TH2LCRR
0.585 0.720 5 132660272 missense variant A/G snv 0.72 0.77 52
rs12917
MGMT ; LOC105378560
0.605 0.480 10 129708019 missense variant C/T snv 0.14 0.14 45
rs144848
BRCA2
0.653 0.440 13 32332592 missense variant A/C snv 0.28 0.23 29
rs2308321
MGMT
0.653 0.480 10 129766800 missense variant A/G snv 9.3E-02 8.7E-02 29
rs1346044
WRN
0.708 0.440 8 31167138 missense variant T/C snv 0.24 0.23 23
rs9808753
IFNGR2
0.701 0.400 21 33415005 missense variant A/G snv 0.20 0.18 17
rs2682818
MIR618 ; LOC105369869 ; LIN7A
0.742 0.320 12 80935757 non coding transcript exon variant A/C;T snv 0.83 14
rs2308327
MGMT
0.790 0.280 10 129766906 missense variant A/G snv 9.4E-02 8.7E-02 10
rs1494555
IL7R
0.790 0.120 5 35871088 missense variant G/A snv 0.64 0.72 8
rs12711521
MASP2 ; TARDBP
0.807 0.240 1 11030859 missense variant C/A snv 0.74 0.63 7
rs2647012 0.790 0.320 6 32696681 intergenic variant T/C snv 0.64 7
rs6457327 0.790 0.320 6 31106253 downstream gene variant A/C snv 0.66 7
rs2857597
AIF1
0.882 0.200 6 31617223 upstream gene variant T/A snv 0.74 3
rs3115667 0.882 0.200 6 31675622 downstream gene variant T/A;C snv 0.74 3
rs8094402
MBP
0.882 0.120 18 76995493 intron variant A/G snv 0.25 3
rs2855429
COL11A2
0.925 0.120 6 33190412 intron variant A/C snv 0.78 2
rs3789068
MIR4435-2HG ; BCL2L11
0.925 0.120 2 111151670 intron variant A/G snv 0.41 2