Disease: Primary malignant neoplasm of lung
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10505477
CASC8 ; PCAT1 ; POU5F1B
0.658 0.400 8 127395198 intron variant A/G snv 0.40 31
rs10511729
LOC101929563
0.742 0.240 9 23557229 intron variant T/G snv 0.35 11
rs10680577
RAB4B-EGLN2 ; EGLN2
0.776 0.160 19 40798690 intron variant -/TACT delins 10
rs11896604
ACYP2
0.776 0.200 2 54252062 intron variant C/A;G;T snv 8
rs12255372
TCF7L2
0.667 0.480 10 113049143 intron variant G/A;T snv 28
rs12683422
LINGO2
0.742 0.240 9 27969442 intron variant C/T snv 5.7E-02 11
rs13042395
SLC52A3
0.752 0.160 20 773867 intron variant C/T snv 5.9E-02 13
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs17728461
LOC105372988 ; HORMAD2
0.776 0.120 22 30202563 intron variant C/G snv 0.25 9
rs1799750
WTAPP1 ; MMP1
0.592 0.760 11 102799765 intron variant C/- delins 0.50 48
rs1800469
B9D2 ; TGFB1
0.547 0.760 19 41354391 intron variant A/G snv 0.69 78
rs1800896
IL19 ; IL10
0.507 0.800 1 206773552 intron variant T/C snv 0.41 113
rs2279744
MDM2
0.605 0.640 12 68808800 intron variant T/G snv 0.31 48
rs2298881
ERCC1
0.653 0.400 19 45423658 intron variant C/A;T snv 25
rs28360071
XRCC4
0.708 0.240 5 83142293 intron variant GATGAGGAAACTAACTCTCAGTGGTGTTTA/- delins 0.48 18
rs3743073
CHRNA3
0.807 0.120 15 78617197 intron variant G/T snv 0.61 11
rs629367
MIR100HG ; MIRLET7A2
0.776 0.200 11 122146306 intron variant C/A snv 0.88 11
rs667282
CHRNA5
0.790 0.120 15 78571130 intron variant T/C snv 0.28 13
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 93
rs830083
DDB2
0.807 0.120 11 47232500 intron variant G/A;C;T snv 6
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs10811474 0.742 0.240 9 21114238 intergenic variant A/G snv 0.44 11
rs753955
LOC105370113
0.776 0.120 13 23719720 regulatory region variant A/G snv 0.50 9
rs13181
KLC3 ; ERCC2
0.487 0.760 19 45351661 stop gained T/A;G snv 4.0E-06; 0.32 134
rs3212986
CD3EAP ; ERCC1
0.620 0.400 19 45409478 stop gained C/A;G;T snv 0.29; 4.3E-06; 4.3E-06 42