DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of stomach, C0024623

Disease: Malignant Neoplasms

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10074991	PRKAA1	0.851	0.120	5	40790449	intron variant	G/A	snv		0.31	7
rs10505477	CASC8 ; PCAT1 ; POU5F1B	0.658	0.400	8	127395198	intron variant	A/G	snv		0.40	31
rs10680577	RAB4B-EGLN2 ; EGLN2	0.776	0.160	19	40798690	intron variant	-/TACT	delins			10
rs10739971	MIRLET7A1 ; MIRLET7F1	0.882	0.080	9	94175398	intron variant	G/A;C	snv			5
rs11134527	MIR218-2 ; SLIT3	0.677	0.400	5	168768351	intron variant	G/A	snv		0.25	24
rs11187842	PLCE1	0.925	0.080	10	94292754	intron variant	C/T	snv		7.8E-02	5
rs12108497	PRIMPOL ; CASP3	0.851	0.080	4	184650403	intron variant	C/G;T	snv			6
rs12733285	ADIPOR1	0.776	0.120	1	202952912	intron variant	C/T	snv		0.26	12
rs13042395	SLC52A3	0.752	0.160	20	773867	intron variant	C/T	snv		5.9E-02	13
rs13361707	PRKAA1	0.882	0.120	5	40791782	intron variant	C/T	snv		0.31	7
rs1342387	ADIPOR1	0.776	0.120	1	202945228	intron variant	T/C	snv		0.53	12
rs13428812	DNMT3A	0.827	0.120	2	25269598	intron variant	A/G	snv		0.31	9
rs1447295	CASC8	0.658	0.400	8	127472793	intron variant	A/C;T	snv			29
rs1520220	LINC02456 ; IGF1	0.807	0.280	12	102402744	intron variant	G/C;T	snv		0.76	9
rs1569686	DNMT3B	0.752	0.400	20	32779273	intron variant	G/A;C;T	snv			15
rs1800469	B9D2 ; TGFB1	0.547	0.760	19	41354391	intron variant	A/G	snv		0.69	78
rs1800795	IL6-AS1 ; IL6 ; STEAP1B	0.494	0.840	7	22727026	intron variant	C/G	snv		0.71	140
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv		0.41	113
rs1927911	TLR4	0.658	0.640	9	117707776	intron variant	A/G	snv		0.62	28
rs2070744	NOS3	0.608	0.680	7	150992991	intron variant	C/T	snv		0.70	54
rs2094258	ERCC5 ; BIVM-ERCC5	0.701	0.280	13	102844409	intron variant	C/T	snv		0.18	20
rs2279744	MDM2	0.605	0.640	12	68808800	intron variant	T/G	snv		0.31	48
rs2424913	DNMT3B	0.708	0.440	20	32786453	intron variant	C/T	snv	0.56	0.53	18
rs2808668	XPA	0.851	0.120	9	97690153	intron variant	C/G;T	snv			7
rs28360071	XRCC4	0.708	0.240	5	83142293	intron variant	GATGAGGAAACTAACTCTCAGTGGTGTTTA/-	delins		0.48	18