Disease: Neoplasm Metastasis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs115785973
SOCS3
0.925 0.080 17 78357871 3 prime UTR variant C/G;T snv 3
rs9589207
MIR17HG ; MIR92A1 ; MIR19B1 ; MIR20A ; MIR19A
0.925 0.080 13 91351335 mature miRNA variant G/A;C snv 5.4E-03; 4.0E-06 4
rs2269772
ITGA3
0.925 0.080 17 50072022 synonymous variant C/T snv 0.17 0.19 6
rs3130
PROM1 ; FGFBP2
0.882 0.080 4 15968315 3 prime UTR variant T/A;C snv 6
rs41274221
MCM7 ; MIR106B ; MIR25 ; MIR93
0.851 0.160 7 100093577 mature miRNA variant C/T snv 6.4E-05 4.9E-05 6
rs1536309
MIR146B
0.851 0.160 10 102435445 upstream gene variant A/G snv 0.32 7
rs3790843
NR5A2
0.827 0.160 1 200041696 intron variant C/T snv 0.29 7
rs1478604
THBS1
0.807 0.240 15 39581120 5 prime UTR variant T/C snv 0.40 9
rs2303428
MSH2
0.776 0.240 2 47476361 splice region variant T/A;C;G snv 4.0E-06; 0.12 9
rs2494752
AKT1
0.790 0.120 14 104797271 upstream gene variant A/G snv 0.85 10
rs3743073
CHRNA3
0.807 0.120 15 78617197 intron variant G/T snv 0.61 11
rs3809865
THCAT158 ; ITGB3
0.790 0.240 17 47311220 3 prime UTR variant T/A;G snv 11
rs629367
MIR100HG ; MIRLET7A2
0.776 0.200 11 122146306 intron variant C/A snv 0.88 11
rs6218
LINC02456 ; HELLPAR ; IGF1
0.732 0.440 12 102399855 3 prime UTR variant A/G snv 2.1E-02 13
rs1179251
IL22 ; LOC105369818
0.763 0.320 12 68251271 intron variant C/G snv 0.18 14
rs7758229
SLC22A3
0.732 0.120 6 160419220 intron variant G/A;T snv 16
rs2295080
MTOR
0.695 0.320 1 11262571 upstream gene variant G/C;T snv 20
rs712
KRAS
0.677 0.360 12 25209618 3 prime UTR variant A/C snv 0.46 24
rs1870377
KDR
0.695 0.520 4 55106807 missense variant T/A snv 0.22 0.20 25
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs1760944
OSGEP ; APEX1
0.672 0.480 14 20454990 non coding transcript exon variant T/C;G snv 26
rs11066280
HECTD4
0.742 0.280 12 112379979 intron variant T/A snv 7.0E-03 27
rs1800734
EPM2AIP1 ; MLH1
0.653 0.400 3 36993455 5 prime UTR variant G/A snv 0.22 30
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36