DisGeNET - a database of gene-disease associations

List of associated variants

Malignant neoplasm of stomach, C0024623

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1135354	IL18R1	0.925	0.080	2	102397842	3 prime UTR variant	T/G	snv		0.23	3
rs115785973	SOCS3	0.925	0.080	17	78357871	3 prime UTR variant	C/G;T	snv			3
rs12083239		0.925	0.080	1	39985357	intergenic variant	G/A;C	snv			3
rs12416605	MIR938 ; SVIL	0.925	0.080	10	29602331	mature miRNA variant	C/T	snv	0.22	0.20	3
rs154268	PRKAA1	0.925	0.080	5	40795766	intron variant	C/T	snv		0.69	3
rs17033	ADH1B	0.925	0.080	4	99307788	3 prime UTR variant	T/C	snv		9.6E-02	3
rs17103265	NFKBIA	0.925	0.080	14	35405503	upstream gene variant	A/-	delins			3
rs199971565	MIR302A ; MIR302D ; MIR302CHG ; MIR302C ; LARP7 ; MIR367 ; MIR302B	0.925	0.080	4	112648384	mature miRNA variant	ACTT/-	delins		2.1E-02	3
rs2172362	LOC105378667	0.925	0.080	1	39829228	intergenic variant	T/C	snv		0.58	3
rs230310	TRIT1	0.925	0.080	1	39842047	intron variant	A/G;T	snv			3
rs3738708	PARP1	0.925	0.080	1	226402338	missense variant	G/A;C	snv		7.0E-06	3
rs3761376	TFF1	0.925	0.080	21	42366929	upstream gene variant	G/A	snv		0.27	3
rs377566281	XRCC1	0.925	0.080	19	43552083	missense variant	C/T	snv	5.6E-05	2.1E-05	3
rs461404	PRKAA1	0.925	0.080	5	40799438	upstream gene variant	G/A	snv		0.70	3
rs4635002	DOCK1	0.925	0.080	10	127064415	intron variant	A/C	snv		0.92	3
rs526934	TCN1	0.925	0.080	11	59866020	intron variant	G/A	snv		0.77	3
rs56288038	IRF1 ; IRF1-AS1	0.925	0.080	5	132483914	3 prime UTR variant	G/C	snv	2.0E-05	7.0E-06	3
rs5999749	MAPK1	0.925	0.080	22	21833371	intron variant	A/C;T	snv			3
rs759397296	CASP2	0.925	0.080	7	143294294	missense variant	T/C	snv	4.0E-06		3
rs7853122	RAPGEF1	0.925	0.080	9	131705224	intron variant	C/T	snv		0.87	3
rs869736	CORO1B ; PTPRCAP	0.925	0.080	11	67437991	3 prime UTR variant	C/A	snv		0.53	3
rs10022537	PROM1	0.925	0.080	4	16075214	intron variant	A/T	snv		0.70	2
rs10052016	SLC6A3	0.925	0.080	5	1427996	intron variant	A/G	snv		0.22	2
rs10088390	SFRP1	0.925	0.080	8	41264249	3 prime UTR variant	C/G	snv		0.19	2
rs1011445550	TP53	0.925	0.080	17	7676391	missense variant	G/C	snv			2