Disease: Malignant Neoplasms
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs5275
PTGS2
0.583 0.560 1 186673926 3 prime UTR variant A/G;T snv 55
rs56250509
MLH1
0.790 0.160 3 37014530 missense variant T/C snv 2.0E-05 10
rs6087990
DNMT3B
0.925 0.080 20 32762102 upstream gene variant T/C;G snv 4
rs699947
VEGFA
0.570 0.680 6 43768652 upstream gene variant A/C;T snv 67
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 61
rs748491031
EGFR
0.827 0.120 7 55200384 stop gained C/G;T snv 1.2E-05 8
rs759412116
ERCC2
0.581 0.640 19 45352210 missense variant C/G;T snv 4.0E-06; 6.0E-05 55
rs763059810
CXCR4
0.623 0.600 2 136115750 missense variant T/C snv 4.0E-06 41
rs773919809
MGMT
0.763 0.200 10 129766957 missense variant C/T snv 2.0E-05 13
rs775144154
SLC19A1
0.627 0.600 21 45531904 missense variant C/A;T snv 9.7E-06; 1.4E-05 38
rs77724903
RET
0.672 0.280 10 43118460 missense variant A/G;T snv 4.0E-06; 2.1E-03 17
rs779315943
DNMT3A
0.882 0.160 2 25247708 frameshift variant TTTCC/- del 5
rs7813
GEMIN4
0.689 0.360 17 744946 missense variant G/A;C snv 0.63 22
rs7903146
TCF7L2
0.554 0.680 10 112998590 intron variant C/G;T snv 79
rs79071878
LOC105379176 ; IL4
0.827 0.240 5 132680652 intron variant ATGAAGCAAGATGGCCTGTTGGGAGGCTACCACAGTAAACCAGGCTAGAGACGATGGTGGCGTGGACAGAATGAAGCAAGATGGCCTGTTGGGAGGCTACCACAGTAAACCAGGCTAGAGATGATGGTGGCGTGGACAGAAT/- del 7
rs799917
BRCA1
0.708 0.320 17 43092919 missense variant G/A;C;T snv 0.40; 1.6E-05 18
rs822395
ADIPOQ
0.776 0.240 3 186849018 intron variant C/A;G snv 10
rs854560
PON1
0.513 0.800 7 95316772 missense variant A/C;G;N;T snv 0.29 110
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs909253
LTA ; LOC100287329
0.641 0.600 6 31572536 intron variant A/G;T snv 32
rs9282861
SULT1A1
0.658 0.440 16 28606193 missense variant C/T snv 31
rs758272654
GNAS
0.611 0.680 20 58909201 synonymous variant T/C snv 4.0E-06 7.0E-06 50
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs148704956
IL17A
0.716 0.360 6 52187772 missense variant A/G snv 8.0E-06 7.0E-06 19
rs746702110
OGG1
0.627 0.480 3 9756778 missense variant C/T snv 1.2E-05 2.8E-05 38