Disease: Carcinogenesis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs486907
RNASEL
0.667 0.360 1 182585422 missense variant C/T snv 0.31 0.28 32
rs753066745
SH3BGRL
X 81277164 missense variant C/T snv 1.7E-05 9.5E-06 2
rs944289 0.742 0.200 14 36180040 upstream gene variant C/T snv 0.45 16
rs121913377
BRAF
0.354 0.840 7 140753335 missense variant CA/AT;TT mnv 480
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1057519847
EGFR
0.570 0.560 7 55191821 missense variant CT/AG mnv 72
rs1285136498
NR3C1
0.807 0.080 5 143400101 missense variant G/A snv 13
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs351855
FGFR4
0.597 0.560 5 177093242 missense variant G/A snv 0.33 0.26 58
rs41291957
CARMN ; MIR145 ; MIR143
0.882 0.200 5 149428827 intron variant G/A snv 0.12 7
rs771308693
PTK2
8 140752306 missense variant G/A snv 3.2E-05 7.0E-06 2
rs861539
KLC1 ; XRCC3
0.519 0.680 14 103699416 missense variant G/A snv 0.29 0.30 104
rs920778
HOTAIR
0.633 0.480 12 53966448 intron variant G/A snv 0.57 36
rs121912651
TP53
0.605 0.680 17 7674221 missense variant G/A;C snv 4.0E-06 53
rs121913254
NRAS
0.658 0.440 1 114713909 stop gained G/A;C;T snv 31
rs13278062
LOC389641 ; TNFRSF10A
0.807 0.200 8 23225458 non coding transcript exon variant G/A;C;T snv 8
rs11547328
CDK4
0.701 0.360 12 57751648 missense variant G/A;T snv 4.0E-06 27
rs77375493
INSL6 ; JAK2
0.458 0.760 9 5073770 missense variant G/A;T snv 3.5E-04 187
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs121913492
GNAQ
0.790 0.160 9 77794572 missense variant T/A;C;G snv 11
rs895819
MIR23A ; LOC284454 ; MIR27A ; MIR24-2
0.623 0.560 19 13836478 non coding transcript exon variant T/A;C;G snv 0.34 0.38 46
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs752021744
PIK3CB
0.689 0.440 3 138759306 missense variant T/C snv 1.2E-05 29