Disease: Malignant neoplasm of prostate
Source: BEFREE ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 40
rs10090154 0.807 0.160 8 127519892 intergenic variant T/A;C snv 7
rs1012477
PER3
0.827 0.160 1 7798075 intron variant G/C snv 0.16 8
rs10165970
NPAS2
0.708 0.320 2 100840527 intron variant G/A snv 0.16 18
rs1042489
BIRC5
0.851 0.160 17 78224125 3 prime UTR variant T/C snv 0.40 5
rs10505474
CASC8 ; PCAT1 ; POU5F1B
0.925 0.080 8 127405259 intron variant T/C snv 0.47 3
rs10519097
RORA
0.708 0.320 15 60997989 intron variant C/T snv 0.13 18
rs1056836
CYP1B1
0.581 0.680 2 38071060 missense variant G/C snv 0.51 58
rs1057519864
AR
0.851 0.080 X 67723707 missense variant T/C snv 8
rs1060501201
TP53
0.925 0.080 17 7674190 missense variant T/C;G snv 4
rs10759932
TLR4
0.732 0.560 9 117702866 upstream gene variant T/C snv 0.18 15
rs10993994
MSMB
0.763 0.280 10 46046326 5 prime UTR variant A/G snv 0.54 10
rs1131691014
TP53
0.439 0.800 17 7676154 frameshift variant -/C ins 213
rs11568818
MMP7
0.763 0.280 11 102530930 upstream gene variant T/A;C snv 15
rs11902171
ITGAV
0.925 0.080 2 186678500 3 prime UTR variant G/C snv 0.22 6
rs11943456
TMEM165
0.708 0.320 4 55410167 intron variant T/C snv 0.42 18
rs1197734477
PTEN
0.925 0.080 10 87961012 missense variant A/G snv 4
rs12757998 0.925 0.080 1 182569343 downstream gene variant C/T snv 0.24 3
rs12826786 0.683 0.480 12 53961717 upstream gene variant C/T snv 0.38 26
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 17
rs137852578
AR
0.827 0.080 X 67723710 missense variant A/G snv 9
rs137852581
AR
0.882 0.080 X 67723701 missense variant C/T snv 4
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 28
rs145204276
ZBTB37 ; SNORD74 ; SNORD75 ; GAS5 ; SNORD77 ; SNORA103 ; SNORD76
0.658 0.320 1 173868254 splice donor variant CAAGG/- delins 8.8E-02 31
rs1463038513
APC
0.658 0.440 5 112839511 frameshift variant TAAA/- delins 36