Disease: Prostate carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs4986791
TLR4
0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 182
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs12338
CTSB
0.807 0.200 8 11853379 missense variant G/A;C;T snv 8.0E-06; 0.38; 2.4E-05 10
rs1801725
CASR
0.633 0.600 3 122284910 missense variant G/T snv 0.13 0.11 39
rs1801726
CASR
0.732 0.280 3 122284985 missense variant G/C snv 0.95 0.92 13
rs1801282
PPARG
0.500 0.840 3 12351626 missense variant C/G snv 0.11 8.9E-02 131
rs16901946
PCAT1 ; CASC19 ; PRNCR1
0.827 0.160 8 127088680 non coding transcript exon variant A/G snv 1.7E-02 8
rs7463708
PCAT1 ; CASC19 ; PRNCR1
0.807 0.120 8 127091810 non coding transcript exon variant G/T snv 0.27 7
rs16901966
CASC19 ; PCAT1
0.925 0.080 8 127098007 intron variant A/G snv 0.13 3
rs16901979
PCAT1 ; CASC19
0.724 0.480 8 127112671 intron variant C/A snv 0.16 17
rs2066827
GPR19 ; CDKN1B
0.695 0.320 12 12718165 missense variant T/A;C;G snv 1.6E-04; 1.6E-05; 0.26 21
rs13281615
CASC8 ; POU5F1B ; PCAT1 ; CASC21
0.716 0.360 8 127343372 intron variant A/G snv 0.43 18
rs6983267
PCAT1 ; CCAT2 ; CASC8 ; POU5F1B
0.578 0.440 8 127401060 non coding transcript exon variant G/T snv 0.37 62
rs10505474
CASC8 ; PCAT1 ; POU5F1B
0.925 0.080 8 127405259 intron variant T/C snv 0.47 3
rs7837328
CASC8 ; PCAT1 ; POU5F1B
0.882 0.120 8 127410882 intron variant A/G snv 0.52 8
rs6470517
CASC8
0.925 0.080 8 127448159 intron variant A/G snv 0.15 3
rs1447295
CASC8
0.658 0.400 8 127472793 intron variant A/C;T snv 29
rs10090154 0.807 0.160 8 127519892 intergenic variant T/A;C snv 7
rs10069690
TERT
0.595 0.560 5 1279675 intron variant C/T snv 0.36 53
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs2736098
TERT
0.600 0.600 5 1293971 synonymous variant C/T snv 0.29 0.22 48
rs2853669
TERT
0.649 0.320 5 1295234 upstream gene variant A/G snv 0.25 35