Disease: Primary malignant neoplasm
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs6265
BDNF ; BDNF-AS
0.436 0.760 11 27658369 missense variant C/T snv 0.19 0.15 272
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs759834365
BDNF-AS ; BDNF
0.448 0.760 11 27658456 missense variant C/T snv 1.2E-05 237
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs5443
CDCA3 ; GNB3
0.532 0.760 12 6845711 synonymous variant C/T snv 0.36 0.44 106
rs1799971
OPRM1
0.559 0.600 6 154039662 missense variant A/G snv 0.19 0.12 95
rs1229984
ADH1B
0.570 0.560 4 99318162 missense variant T/C;G snv 0.90 83
rs2736100
TERT
0.550 0.880 5 1286401 3 prime UTR variant C/A snv 0.52 83
rs1800497
ANKK1
0.620 0.400 11 113400106 missense variant G/A snv 0.26 0.26 56
rs1051730
CHRNA3
0.641 0.600 15 78601997 synonymous variant G/A snv 0.27 0.26 43
rs401681
CLPTM1L
0.620 0.640 5 1321972 intron variant C/T snv 0.48 42
rs16969968
CHRNA5
0.653 0.360 15 78590583 missense variant G/A snv 0.26 0.24 37
rs2853676
TERT
0.667 0.560 5 1288432 intron variant T/A;C snv 29
rs8034191
HYKK
0.695 0.440 15 78513681 intron variant T/C snv 0.27 24
rs698
ADH1C ; ADH1B
0.724 0.240 4 99339632 missense variant T/A;C snv 0.35 20
rs13280604
CHRNB3 ; LOC105379396
0.851 0.160 8 42704443 5 prime UTR variant G/A snv 0.62 7
rs1573496
ADH7
0.827 0.160 4 99428512 missense variant C/G snv 8.5E-02; 4.9E-04 7.8E-02 7
rs28399433
CYP2A6
0.827 0.200 19 40850474 intron variant A/C;G;T snv 0.10; 4.4E-06 7
rs8192789
CYP2A13
1.000 0.080 19 41091846 missense variant C/A;T snv 4.0E-06; 3.1E-02 3