Disease: Rheumatoid Arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs2023305
CCR6
0.851 0.280 6 167111410 intron variant C/T snv 0.38 4
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs2237892
KCNQ1
0.790 0.320 11 2818521 intron variant C/T snv 9.2E-02 16
rs243865
MMP2
0.600 0.640 16 55477894 intron variant C/T snv 0.19 48
rs5443
CDCA3 ; GNB3
0.532 0.760 12 6845711 synonymous variant C/T snv 0.36 0.44 106
rs7044343
LOC107987046 ; IL33
0.752 0.520 9 6254208 intron variant C/T snv 0.51 13
rs8193036
IL17A
0.689 0.600 6 52185695 upstream gene variant C/T snv 0.72 21
rs1799782
XRCC1
0.474 0.800 19 43553422 missense variant G/A snv 9.5E-02 7.0E-02 151
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs367732974
F7
0.790 0.360 13 113105788 5 prime UTR variant G/A snv 8.9E-05 2.8E-05 9
rs6314
HTR2A
0.677 0.360 13 46834899 missense variant G/A snv 7.9E-02 9.5E-02 23
rs1800470
TGFB1
0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 107
rs599839
PSRC1
0.724 0.360 1 109279544 downstream gene variant G/A;C snv 27
rs1800796
IL6-AS1 ; STEAP1B ; IL6
0.555 0.760 7 22726627 non coding transcript exon variant G/C snv 9.9E-02 74
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs2231142
ABCG2
0.583 0.680 4 88131171 missense variant G/C;T snv 4.0E-06; 0.12 56
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213
rs4684677
GHRLOS ; GHRL
0.742 0.360 3 10286769 missense variant T/A snv 0.10 6.6E-02 13
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs281864525
HBB
0.851 0.280 11 5227097 5 prime UTR variant T/A;G snv 7.0E-06 4
rs25487
XRCC1
0.441 0.800 19 43551574 missense variant T/C snv 0.68 0.71 205
rs562962093
MBL2
0.742 0.520 10 52771740 upstream gene variant T/C snv 7.0E-06 13