DisGeNET - a database of gene-disease associations

List of associated variants

Parkinson Disease, C0030567

Source: GWASDB ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs3851179		0.752	0.280	11	86157598	downstream gene variant	T/C	snv		0.70	3
rs11136000	CLU	0.752	0.160	8	27607002	intron variant	T/C	snv		0.56	3
rs12411886	CNNM2	0.882	0.080	10	102925542	intron variant	C/A	snv		7.8E-02	3
rs17574604	KANSL1	0.925	0.120	17	46034247	synonymous variant	A/G	snv	0.15	0.14	3
rs17577094	KANSL1	0.925	0.120	17	46110126	intron variant	A/G	snv		0.14	3
rs2668692	KANSL1	1.000	0.040	17	46215654	intron variant	G/A;T	snv			3
rs17574228	KANSL1 ; MAPT	0.925	0.120	17	46027143	3 prime UTR variant	T/C	snv		0.14	3
rs7215239	LINC02210-CRHR1	1.000	0.040	17	45690407	intron variant	T/C	snv		0.30	3
rs2942168	LINC02210-CRHR1 ; LINC02210	0.925	0.120	17	45637484	non coding transcript exon variant	G/A;C;T	snv		0.14	3
rs241041	LINC02210 ; LINC02210-CRHR1	0.925	0.120	17	45636559	non coding transcript exon variant	A/C;G;T	snv		0.14	3
rs183211	LRRC37A2 ; NSF	0.882	0.160	17	46710944	intron variant	G/A	snv	0.28	0.30	3
rs2074404	LRRC37A2 ; WNT3	0.925	0.120	17	46788073	intron variant	T/G	snv		0.27	3
rs10445337	MAPT	0.925	0.120	17	45990034	missense variant	T/C	snv	0.15	0.15	3
rs1052587	MAPT	0.925	0.120	17	46025238	3 prime UTR variant	T/C	snv		0.14	3
rs17563986	MAPT	1.000	0.040	17	45913906	intron variant	A/G	snv		0.14	3
rs17650901	MAPT	0.925	0.120	17	45962325	5 prime UTR variant	A/G	snv	0.14	0.14	3
rs17652121	MAPT	0.925	0.120	17	45996607	synonymous variant	T/C	snv	0.14	0.15	3
rs1800547	MAPT	0.925	0.120	17	45974480	non coding transcript exon variant	A/G	snv	0.15	0.14	3
rs1981997	MAPT	1.000	0.040	17	45979401	non coding transcript exon variant	G/A	snv		0.14	3
rs12185235	MAPT-AS1 ; SPPL2C	0.925	0.120	17	45846337	synonymous variant	C/T	snv	0.14	0.14	3
rs12185268	MAPT-AS1 ; SPPL2C	0.851	0.160	17	45846317	missense variant	A/G	snv	0.15	0.14	3
rs767057	MAPT ; LOC105371800	0.925	0.120	17	45921456	intron variant	A/G	snv		0.14	3
rs1801133	MTHFR	0.472	0.880	1	11796321	missense variant	G/A	snv	0.31	0.27	3
rs169201	NSF ; LRRC37A2	0.925	0.160	17	46712837	intron variant	A/G	snv		0.13	3
rs2284063	PLA2G6	0.851	0.160	22	38148291	non coding transcript exon variant	A/G	snv		0.40	3