Disease: Juvenile arthritis
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1217691063
MTHFR
0.330 0.920 1 11796309 missense variant A/G snv 4.0E-06 7.0E-06 614
rs397507444
MTHFR
0.405 0.880 1 11794407 missense variant T/G snv 306
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs361525
TNF
0.562 0.760 6 31575324 upstream gene variant G/A snv 4.6E-02 62
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs11209026
IL23R
0.597 0.680 1 67240275 missense variant G/A snv 4.2E-02 4.6E-02 46
rs237025
SUMO4 ; TAB2
0.672 0.360 6 149400554 missense variant G/A snv 0.55 0.57 26
rs6679677
PHTF1
0.653 0.320 1 113761186 upstream gene variant C/A snv 6.7E-02 26
rs2104286
IL2RA
0.662 0.440 10 6057082 intron variant T/C snv 0.18 25
rs34536443
TYK2
0.667 0.400 19 10352442 missense variant G/C snv 2.7E-02 2.8E-02 25
rs706778
IL2RA
0.695 0.320 10 6056986 intron variant C/T snv 0.46 19
rs12232497 0.701 0.360 17 39883866 intergenic variant T/C snv 0.35 18
rs4625
DAG1
0.716 0.280 3 49534707 3 prime UTR variant A/G snv 0.30 17
rs4676410
GPR35
0.716 0.240 2 240624322 intron variant G/A snv 0.26 17
rs1689510
SUOX
0.724 0.240 12 56002984 non coding transcript exon variant G/C snv 0.25 16
rs4246905
TNFSF15
0.716 0.400 9 114790969 missense variant T/A;C snv 0.76 16
rs602662
LOC105447645 ; FUT2
0.716 0.280 19 48703728 missense variant G/A snv 0.40 0.47 16
rs7725052 0.716 0.240 5 40487168 intron variant C/T snv 0.52 16
rs7731626
ANKRD55
0.716 0.240 5 56148856 intron variant G/A snv 0.30 16
rs12598357 0.724 0.240 16 28329624 intergenic variant A/G snv 0.43 15
rs12928404
ATXN2L
0.724 0.240 16 28835925 splice region variant T/C snv 0.44 0.45 15
rs2836882 0.724 0.240 21 39094644 intergenic variant G/A snv 0.23 15
rs36051895 0.716 0.240 9 4981866 upstream gene variant G/T snv 0.25 15