Disease: Colorectal Carcinoma
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs2070600
AGER
0.561 0.760 6 32183666 missense variant C/T snv 5.3E-02 3.6E-02 82
rs3918242
MMP9
0.602 0.680 20 46007337 upstream gene variant C/T snv 0.14 54
rs1050450
GPX1
0.623 0.600 3 49357401 missense variant G/A snv 0.28 0.30 43
rs1143627
IL1B
0.605 0.760 2 112836810 5 prime UTR variant G/A snv 0.56 47
rs115707823 0.701 0.320 6 30374976 intergenic variant G/A snv 19
rs1258159645
NQO1
0.630 0.600 16 69711128 missense variant G/A snv 7.0E-06 37
rs1800562
LOC108783645 ; HFE
0.435 0.880 6 26092913 missense variant G/A snv 3.3E-02 3.8E-02 262
rs1800566
NQO1
0.576 0.680 16 69711242 missense variant G/A snv 0.25 0.21 59
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs2236225
MTHFD1
0.614 0.640 14 64442127 missense variant G/A snv 0.44 0.38 52
rs4680
COMT ; MIR4761
0.442 0.920 22 19963748 missense variant G/A snv 0.46 0.44 249
rs4848306 0.851 0.120 2 112840530 non coding transcript exon variant G/A snv 0.39 6
rs671
ALDH2
0.529 0.840 12 111803962 missense variant G/A snv 1.9E-02 5.8E-03 116
rs9944880
DCC
0.882 0.120 18 53125996 intron variant G/A snv 5.3E-02 3
rs3813867
LOC107984284 ; CYP2E1
0.732 0.240 10 133526101 intron variant G/A;C snv 13
rs7799039
LOC105375494
0.649 0.560 7 128238730 upstream gene variant G/A;C snv 33
rs4950928
CHI3L1
0.653 0.560 1 203186754 upstream gene variant G/A;C;T snv 33
rs2227947
MCC
0.925 0.120 5 113064094 missense variant G/A;T snv 0.61 0.50 2
rs2227948
MCC
0.925 0.120 5 113043592 synonymous variant G/A;T snv 0.53; 4.0E-06 2
rs1042522
TP53
0.426 0.800 17 7676154 missense variant G/C;T snv 0.67 242
rs1501299
ADIPOQ ; ADIPOQ-AS1
0.597 0.720 3 186853334 intron variant G/C;T snv 52
rs2228001
XPC
0.570 0.480 3 14145949 missense variant G/T snv 0.63 0.65 60
rs878854066
TP53
0.439 0.800 17 7676153 missense variant GG/AC mnv 213