DisGeNET - a database of gene-disease associations

List of shared variants

Sleep disturbances, C0037317

Disease: Sleep Disorders

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1800629	TNF	0.472	0.920	6	31575254	upstream gene variant	G/A	snv	0.12	0.14	169
rs671	ALDH2	0.529	0.840	12	111803962	missense variant	G/A	snv	1.9E-02	5.8E-03	116
rs34637584	LRRK2	0.583	0.480	12	40340400	missense variant	G/A	snv	5.3E-04	3.6E-04	78
rs104893877	SNCA	0.614	0.360	4	89828149	missense variant	C/T	snv			59
rs28934906	MECP2	0.716	0.320	X	154031355	missense variant	G/A	snv			46
rs61816761	FLG ; FLG-AS1	0.658	0.640	1	152313385	stop gained	G/A;T	snv	9.4E-03; 8.0E-06		43
rs1801260	CLOCK ; TMEM165	0.695	0.280	4	55435202	3 prime UTR variant	A/G	snv		0.25	28
rs10830963	MTNR1B	0.776	0.400	11	92975544	intron variant	C/G	snv		0.22	27
rs28933385	PRNP	0.695	0.320	20	4699818	missense variant	G/A	snv	4.0E-06		25
rs2230912	P2RX7 ; LOC105370032	0.752	0.280	12	121184393	missense variant	A/G	snv	0.13	0.12	16
rs61751362	MECP2	0.790	0.160	X	154030948	stop gained	G/A;C	snv	1.6E-05		14
rs11932595	CLOCK	0.827	0.160	4	55457430	intron variant	A/G;T	snv			12
rs767181086	LAMC2	0.827	0.240	1	183220922	stop gained	G/A;T	snv	8.0E-06; 4.0E-06		11
rs1481318368	TH	0.827	0.120	11	2169802	missense variant	C/T	snv			10
rs738499	TEF ; LOC105373042	0.851	0.120	22	41381096	intron variant	G/T	snv		0.76	9
rs1212171	NTRK2	0.851	0.120	9	84667612	upstream gene variant	C/T	snv		0.50	8
rs11824092	ARNTL	0.925	0.080	11	13324747	intron variant	T/C	snv		0.62	7
rs10766075	ARNTL	0.925	0.080	11	13297040	intron variant	C/T	snv		0.27	6
rs11022778	ARNTL	0.925	0.080	11	13369313	intron variant	T/A;G	snv			6
rs156243		0.925	0.080	6	104416939	intergenic variant	G/A	snv		0.65	6
rs2291739	TIMELESS	0.925	0.080	12	56420869	missense variant	G/A;C	snv	0.49; 4.0E-06		6
rs3789327	ARNTL	0.925	0.080	11	13363769	intron variant	A/G	snv		0.53	6
rs4719714	STEAP1B	1.000	0.080	7	22721094	intron variant	A/T	snv		0.21	5
rs11600996	ARNTL	1.000	0.040	11	13374619	intron variant	T/C	snv		0.40	4
rs1229030855	TIMELESS	0.925	0.080	12	56428321	missense variant	A/G;T	snv	4.0E-06; 4.0E-06		4