DisGeNET - a database of gene-disease associations

List of associated variants

Post-Traumatic Stress Disorder, C0038436

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs523349	SRD5A2	0.689	0.440	2	31580636	missense variant	G/A;C;T	snv	0.66; 4.9E-06		21
rs324981	NPSR1-AS1 ; NPSR1	0.724	0.320	7	34778501	missense variant	A/T	snv	0.44	0.47	18
rs3091244	CRP	0.724	0.280	1	159714875	upstream gene variant	G/A;T	snv			17
rs9296158	FKBP5 ; LOC112267956	0.763	0.080	6	35599305	intron variant	A/G	snv		0.65	16
rs4606	RGS2	0.752	0.120	1	192812042	3 prime UTR variant	C/G;T	snv			16
rs7103411	BDNF ; BDNF-AS	0.752	0.160	11	27678578	intron variant	C/T	snv		0.82	15
rs9470080	FKBP5	0.827	0.080	6	35678658	intron variant	T/A;C	snv			13
rs110402	CRHR1 ; LINC02210-CRHR1 ; MAPT-AS1	0.790	0.120	17	45802681	intron variant	G/A;C	snv			12
rs1143633	IL1B	0.752	0.280	2	112832890	intron variant	C/G;T	snv			11
rs27072	SLC6A3	0.807	0.120	5	1394407	3 prime UTR variant	C/A;T	snv			11
rs6269	COMT ; MIR4761	0.827	0.240	22	19962429	5 prime UTR variant	A/G	snv		0.38	10
rs17070145	WWC1	0.790	0.120	5	168418786	intron variant	C/T	snv		0.43	10
rs2794520		0.807	0.240	1	159709026	upstream gene variant	C/A;T	snv			9
rs2271933	HCRTR1	0.807	0.080	1	31626924	missense variant	A/G	snv	0.56	0.50	9
rs4523957	SMG6 ; SRR	0.790	0.120	17	2305605	intron variant	G/T	snv		0.54	9
rs2268498	CAV3 ; OXTR	0.827	0.080	3	8770725	intron variant	T/C	snv		0.41	7
rs2295633	FAAH	0.827	0.120	1	46408711	intron variant	A/G;T	snv			7
rs28363170	SLC6A3	0.827	0.120	5	1393745	3 prime UTR variant	-/AGTGGGGGCCCTGCATGCGTCCTGGGGTAGTACACGCTCC	delins		8.1E-06	7
rs1386494	TPH2	0.790	0.120	12	71958763	intron variant	T/C;G	snv		0.82	7
rs7131056	DRD2	0.827	0.200	11	113459052	intron variant	A/C	snv		0.51	6
rs3749034	GAD1	0.827	0.040	2	170816965	5 prime UTR variant	G/A;T	snv			6
rs12938031	LINC02210-CRHR1	0.851	0.160	17	45777136	intron variant	A/G	snv		0.26	6
rs17689918	LINC02210-CRHR1 ; MAPT-AS1 ; CRHR1	0.851	0.080	17	45832722	intron variant	G/A	snv		0.15	6
rs6189	NR3C1	0.827	0.240	5	143400774	missense variant	C/A;T	snv	4.0E-06; 1.8E-02		6
rs9804190	ANK3	0.882	0.040	10	60080073	intron variant	C/T	snv		0.30	5