DisGeNET - a database of gene-disease associations

List of shared variants

Unipolar Depression, C0041696

Disease: Depressive disorder

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1432441	MAP2K1	0.882	0.040	15	66426943	intron variant	G/A	snv		0.27	3
rs1549854	MAP2K1	0.882	0.040	15	66404397	intron variant	A/C;G	snv		0.44	3
rs1488864	LOC101927825 ; CAVIN3	0.851	0.080	11	6321099	intron variant	T/G	snv		0.80	4
rs11904814	CREB1	0.851	0.080	2	207562074	intron variant	T/G	snv		0.30	5
rs174697	ARVCF ; COMT	0.851	0.080	22	19966309	intron variant	A/G	snv		0.88	5
rs61888800	BDNF	0.851	0.080	11	27700731	5 prime UTR variant	G/T	snv		0.19	5
rs794727961	CACNA1C	0.851	0.080	12	2512979	missense variant	G/A	snv			5
rs9825823	FHIT	0.851	0.080	3	61096480	intron variant	T/C	snv		0.47	5
rs10514299	TMEM161B-AS1	0.827	0.120	5	88367793	intron variant	C/T	snv		0.21	6
rs1545843	LOC107984536	0.827	0.120	12	84170289	intron variant	G/A	snv		0.52	6
rs2253206		0.851	0.080	2	207527254	intron variant	A/G	snv		0.47	6
rs120074175	TPH2	0.827	0.080	12	72031544	missense variant	G/A	snv	1.2E-05	7.0E-06	7
rs2522833	PCLO	0.827	0.080	7	82824392	missense variant	A/C	snv	0.45	0.34	7
rs7305115	TPH2	0.807	0.200	12	71979082	synonymous variant	A/C;G;T	snv	4.0E-06; 0.56		8
rs2242446	SLC6A2	0.776	0.080	16	55656513	5 prime UTR variant	C/A;T	snv			9
rs9722	S100B	0.776	0.200	21	46599326	3 prime UTR variant	G/A	snv	0.16; 2.4E-05	0.21	9
rs11030101	BDNF-AS ; BDNF	0.763	0.160	11	27659197	5 prime UTR variant	A/T	snv		0.36	10
rs4713916	FKBP5	0.790	0.160	6	35702206	intron variant	A/C;G;T	snv			11
rs7997012	HTR2A	0.807	0.080	13	46837850	intron variant	A/G	snv		0.69	11
rs1800532	TPH1	0.763	0.160	11	18026269	intron variant	G/T	snv		0.33	15
rs2230912	P2RX7 ; LOC105370032	0.752	0.280	12	121184393	missense variant	A/G	snv	0.13	0.12	16
rs9296158	FKBP5 ; LOC112267956	0.763	0.080	6	35599305	intron variant	A/G	snv		0.65	16
rs1805054	HTR6	0.708	0.200	1	19666020	synonymous variant	C/T	snv	0.15; 8.0E-06	0.16	17
rs1176744	HTR3B	0.708	0.240	11	113932306	missense variant	A/C	snv	0.33	0.36	19
rs5569	SLC6A2	0.742	0.280	16	55697923	synonymous variant	G/A;C	snv	0.31; 4.0E-06		19