Source: GWASCAT ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 34
rs12203592
IRF4
0.649 0.320 6 396321 intron variant C/T snv 0.10 20
rs72928038
BACH2
0.695 0.360 6 90267049 intron variant G/A snv 0.11 19
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 12
rs4409785 0.752 0.240 11 95578258 intron variant T/C snv 0.13 12
rs6059655
RALY
0.790 0.080 20 34077942 intron variant A/G snv 0.95 10
rs769449
APOE
0.882 0.120 19 44906745 non coding transcript exon variant G/A snv 8.4E-02 8
rs1126809
LOC107984363 ; TYR
0.683 0.320 11 89284793 missense variant G/A snv 0.18 0.18 8
rs71508903
ARID5B
0.807 0.160 10 62020112 intron variant C/T snv 0.15 7
rs1129038
HERC2
0.851 0.120 15 28111713 3 prime UTR variant C/T snv 0.49 0.50 6
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 6
rs10774624
LINC02356
0.882 0.160 12 111395984 intron variant G/A snv 0.67 5
rs1393350
LOC107984363 ; TYR
0.851 0.160 11 89277878 intron variant G/A snv 0.17 5
rs251464
PPARGC1B
0.851 0.080 5 149816671 intron variant G/C snv 0.36 5
rs4766578
ATXN2
0.851 0.200 12 111466567 intron variant T/A snv 0.66 4
rs117744081
CPVL
0.851 0.080 7 29092663 missense variant A/G snv 2.2E-02 2.3E-02 4
rs968567
FADS2 ; FADS1
0.851 0.240 11 61828092 intron variant C/T snv 0.11 4
rs2395185
HLA-DRB9
0.724 0.360 6 32465390 intron variant G/T snv 0.29 4
rs10876864
IKZF4
0.882 0.120 12 56007301 upstream gene variant G/A snv 0.50 4
rs706779
IL2RA
0.827 0.160 10 6056861 intron variant T/C snv 0.48 4
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 4
rs301807
RERE-AS1 ; RERE
0.925 0.080 1 8424763 intron variant A/G;T snv 4
rs11203203
UBASH3A
0.807 0.240 21 42416077 intron variant G/A snv 0.28 4
rs4268748
DEF8
0.925 0.080 16 89960104 intron variant T/C snv 0.30 3
rs1701704
LOC105369781 ; IKZF4
0.851 0.200 12 56018703 intron variant T/G snv 0.25 3