DisGeNET - a database of gene-disease associations

List of associated variants

B-Cell Lymphomas, C0079731

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs1494555	IL7R	0.790	0.120	5	35871088	missense variant	G/A	snv	0.64	0.72	8
rs387907272	MYD88	0.572	0.520	3	38141150	stop lost	T/C	snv	5.2E-05	7.0E-06	73
rs539846	BMF	1.000	0.120	15	40105735	intron variant	G/C;T	snv			2
rs1053023	STAT3	0.882	0.120	17	42313598	3 prime UTR variant	T/A;C	snv			4
rs2227945	BRCA1	1.000	0.080	17	43092113	missense variant	T/C;G	snv	2.5E-03	1.0E-02	2
rs25487	XRCC1	0.441	0.800	19	43551574	missense variant	T/C	snv	0.68	0.71	205
rs1799782	XRCC1	0.474	0.800	19	43553422	missense variant	G/A	snv	9.5E-02	7.0E-02	151
rs11886868	BCL11A	0.752	0.280	2	60493111	intron variant	C/T	snv		0.65	12
rs4671393	BCL11A	0.790	0.400	2	60493816	intron variant	A/C;G	snv			11
rs149627368	REL			2	60922344	missense variant	T/C	snv	1.5E-04	1.0E-04	1
rs1057520009	XPO1	0.790	0.200	2	61492337	missense variant	C/T	snv	4.4E-06		14
rs17757541	BCL2	0.827	0.240	18	63212453	intron variant	C/G;T	snv			7
rs1800477	BCL2	0.763	0.480	18	63318540	missense variant	C/T	snv	1.8E-02	4.9E-03	12
rs355689	LOC105377296 ; CXCL13	1.000	0.040	4	77586643	intron variant	T/A;C	snv			2
rs6857600	ABCG2	0.925	0.120	4	88144923	intron variant	C/T	snv		0.28	3
rs662	PON1	0.485	0.840	7	95308134	missense variant	T/C	snv	0.38	0.42	157
rs764643047	OGG1	0.851	0.120	3	9750336	missense variant	C/T	snv	4.0E-06		5