DisGeNET - a database of gene-disease associations

List of associated variants

Epstein-Barr Virus Infections, C0149678

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs2854275	HLA-DQB1 ; HLA-DQB1-AS1	0.925	0.120	6	32660651	non coding transcript exon variant	C/A	snv		9.6E-02	4
rs7192	HLA-DRA	0.827	0.200	6	32443869	missense variant	T/G	snv	0.64	0.61	7
rs7194	HLA-DRA	0.827	0.280	6	32444703	3 prime UTR variant	G/A	snv		0.61	7
rs2239804	HLA-DRA	0.851	0.240	6	32443746	intron variant	T/A;C	snv	0.51		5
rs2395182	HLA-DRA	0.851	0.280	6	32445540	downstream gene variant	G/T	snv		0.76	5
rs2239802	HLA-DRA	0.882	0.200	6	32444069	intron variant	C/A;G;T	snv			4
rs2239803	HLA-DRA	0.882	0.240	6	32444056	intron variant	C/A;T	snv		0.50	4
rs3129888	HLA-DRA	0.882	0.240	6	32443949	intron variant	G/A	snv	0.82	0.80	4
rs2213585	HLA-DRA	1.000	0.040	6	32445373	downstream gene variant	G/A	snv		0.61	2
rs2213586	HLA-DRA	1.000	0.040	6	32445317	downstream gene variant	A/G	snv		0.61	2
rs4935356	HLA-DRA	1.000	0.080	6	32444611	intron variant	T/A;G	snv			2
rs7195	HLA-DRA	1.000	0.040	6	32444762	3 prime UTR variant	A/G	snv		0.61	2
rs8084	HLA-DRA	1.000	0.120	6	32443258	splice acceptor variant	A/C;T	snv	0.61; 8.1E-06		2
rs9268658	HLA-DRA	1.000	0.040	6	32442939	intron variant	G/A;C	snv			2
rs2516049	HLA-DRB1	0.742	0.400	6	32602623	intergenic variant	T/C	snv		0.27	12
rs477515	HLA-DRB1	0.790	0.400	6	32601914	intergenic variant	G/A	snv		0.27	10
rs28366298	HLA-DRB1	0.925	0.120	6	32593082	upstream gene variant	A/C;T	snv			3
rs2395185	HLA-DRB9	0.724	0.360	6	32465390	intron variant	G/T	snv		0.29	17
rs9268853	HLA-DRB9	0.790	0.440	6	32461866	intron variant	T/C	snv		0.29	10
rs9268832	HLA-DRB9	0.882	0.160	6	32460012	non coding transcript exon variant	T/C	snv	0.61	0.59	4
rs9368726	HLA-DRB9			6	32470765	intron variant	T/C	snv		0.29	1
rs9405108	HLA-DRB9			6	32470871	intron variant	C/T	snv		0.29	1
rs1800871	IL19 ; IL10	0.508	0.800	1	206773289	5 prime UTR variant	A/G	snv		0.69	108
rs1161098	LOC105369812 ; LINC02408			12	67453680	intron variant	G/A	snv		0.84	1
rs9267536	LOC105375019 ; LY6G5C			6	31683417	intron variant	A/C	snv		5.3E-02	1