Disease: Squamous cell carcinoma of the head and neck
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1057519928
PIK3CA
0.807 0.200 3 179221147 missense variant A/C snv 8
rs1057519932
PIK3CA
0.683 0.320 3 179234298 missense variant T/G snv 22
rs1057519975
TP53
0.649 0.480 17 7675209 missense variant A/C;G;T snv 34
rs1057519977
TP53
0.763 0.360 17 7675189 missense variant G/C snv 13
rs1057519978
TP53
0.763 0.360 17 7675191 missense variant A/C;G;T snv 12
rs1057519986
TP53
0.776 0.240 17 7673811 missense variant A/C;G snv 10
rs1057519987
TP53
0.776 0.280 17 7673810 missense variant A/C snv 10
rs1057519988
TP53
0.776 0.240 17 7673812 missense variant A/C;G;T snv 10
rs1057519989
TP53
0.732 0.240 17 7674233 missense variant C/A;G;T snv 17
rs1057519991
TP53
0.662 0.440 17 7675076 missense variant T/A;C;G snv 4.0E-06 26
rs1057520003
TP53
0.695 0.320 17 7675996 missense variant T/G snv 20
rs1057520004
TP53
0.752 0.240 17 7674884 missense variant A/C;T snv 12
rs1057520007
TP53
0.701 0.440 17 7674917 missense variant T/A;C;G snv 21
rs11540652
TP53
0.592 0.640 17 7674220 missense variant C/A;G;T snv 1.2E-05 57
rs121434568
EGFR
0.568 0.560 7 55191822 missense variant T/A;G snv 73
rs121909229
PTEN
0.683 0.400 10 87933148 missense variant G/A;C;T snv 23
rs121912651
TP53
0.605 0.680 17 7674221 missense variant G/A;C snv 4.0E-06 53
rs121912655
TP53
0.724 0.400 17 7674238 missense variant C/A;G;T snv 15
rs121912656
TP53
0.662 0.560 17 7674229 missense variant C/A;G;T snv 4.0E-06; 4.0E-06 28
rs121912660
TP53
0.683 0.240 17 7673781 missense variant C/A;G;T snv 26
rs121912666
TP53
0.645 0.360 17 7674872 missense variant T/C;G snv 8.0E-06 34
rs121913233
HRAS ; LRRC56
0.627 0.520 11 533874 missense variant T/A;C;G snv 37
rs121913273
PIK3CA
0.605 0.440 3 179218294 missense variant G/A;C snv 44
rs121913274
PIK3CA
0.645 0.320 3 179218304 missense variant A/C;G;T snv 33
rs121913275
PIK3CA
0.672 0.320 3 179218305 missense variant G/A;C;T snv 4.0E-06 26