DisGeNET - a database of gene-disease associations

List of shared variants

Cutaneous Melanoma, C0151779

Disease: Liver carcinoma

Source: CLINVAR ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs1057519959	SF3B2	0.882	0.200	11	66063028	missense variant	A/C	snv		4
rs1057519747	TP53	0.716	0.280	17	7675094	missense variant	A/C;G;T	snv		17
rs1057519997	TP53	0.776	0.320	17	7676037	missense variant	A/C;G;T	snv		9
rs1057520006	TP53	0.752	0.240	17	7673799	missense variant	A/C;G;T	snv		12
rs121913274	PIK3CA	0.645	0.320	3	179218304	missense variant	A/C;G;T	snv		28
rs121913396	CTNNB1	0.732	0.200	3	41224607	missense variant	A/C;G;T	snv		11
rs121913412	CTNNB1	0.724	0.280	3	41224633	missense variant	A/C;G;T	snv		10
rs530941076	TP53	0.695	0.280	17	7674873	missense variant	A/C;G;T	snv	4.0E-06	20
rs786203436	TP53	0.701	0.280	17	7675125	missense variant	A/C;G;T	snv		15
rs876660821	TP53	0.689	0.400	17	7675075	missense variant	A/C;G;T	snv		21
rs1057519983	TP53	0.724	0.360	17	7673797	missense variant	A/G	snv		16
rs121913279	PIK3CA	0.526	0.560	3	179234297	missense variant	A/G;T	snv	4.0E-06; 4.0E-06	45
rs1057520005	TP53	0.742	0.360	17	7673800	missense variant	C/A;G	snv		11
rs104894226	LRRC56 ; HRAS	0.658	0.560	11	534285	missense variant	C/A;G;T	snv		23
rs104894228	LRRC56 ; HRAS	0.605	0.560	11	534286	missense variant	C/A;G;T	snv		30
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		52
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		36
rs11540652	TP53	0.592	0.640	17	7674220	missense variant	C/A;G;T	snv	1.2E-05	42
rs11554273	GNAS	0.689	0.240	20	58909365	missense variant	C/A;G;T	snv	4.0E-06	17
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv		18
rs121913400	CTNNB1	0.683	0.360	3	41224610	missense variant	C/A;G;T	snv		17
rs121913409	CTNNB1	0.708	0.400	3	41224646	missense variant	C/A;G;T	snv		9
rs121913500	IDH1	0.529	0.600	2	208248388	missense variant	C/A;G;T	snv	4.0E-06	18
rs28934576	TP53	0.554	0.600	17	7673802	missense variant	C/A;G;T	snv	4.0E-06; 1.6E-05	39
rs587778720	TP53	0.667	0.360	17	7674893	missense variant	C/A;G;T	snv	4.0E-06	25