DisGeNET - a database of gene-disease associations

List of shared variants

Cutaneous Melanoma, C0151779

Disease: Squamous cell carcinoma of skin

Source: CLINVAR ×

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	Num. diseases
rs104894229	LRRC56 ; HRAS	0.564	0.600	11	534289	missense variant	C/A;G;T	snv		52
rs11540652	TP53	0.592	0.640	17	7674220	missense variant	C/A;G;T	snv	1.2E-05	42
rs121912651	TP53	0.605	0.680	17	7674221	missense variant	G/A;C	snv	4.0E-06	37
rs104894230	HRAS ; LRRC56	0.564	0.600	11	534288	missense variant	C/A;G;T	snv		36
rs121913355	BRAF	0.641	0.520	7	140781602	missense variant	C/A;G;T	snv	4.0E-06	32
rs104894228	LRRC56 ; HRAS	0.605	0.560	11	534286	missense variant	C/A;G;T	snv		30
rs28934574	TP53	0.658	0.440	17	7673776	missense variant	G/A;C	snv	4.0E-06	27
rs397516436	TP53	0.641	0.440	17	7674894	stop gained	G/A;C	snv		26
rs587778720	TP53	0.667	0.360	17	7674893	missense variant	C/A;G;T	snv	4.0E-06	25
rs28934573	TP53	0.667	0.480	17	7674241	missense variant	G/A;C;T	snv	4.0E-06	24
rs786201057	TP53	0.677	0.400	17	7675995	missense variant	G/A;C;T	snv		24
rs104894226	LRRC56 ; HRAS	0.658	0.560	11	534285	missense variant	C/A;G;T	snv		23
rs587780070	TP53	0.683	0.320	17	7675077	missense variant	G/A;C;T	snv	4.0E-06	23
rs730882008	TP53	0.683	0.440	17	7673775	missense variant	C/A;G;T	snv	4.0E-06	22
rs193920774	TP53	0.695	0.440	17	7673823	missense variant	C/A;T	snv		21
rs876660821	TP53	0.689	0.400	17	7675075	missense variant	A/C;G;T	snv		21
rs1057520002	TP53	0.695	0.360	17	7674242	missense variant	A/C;G	snv		20
rs1057520003	TP53	0.695	0.320	17	7675996	missense variant	T/G	snv		20
rs121913233	HRAS ; LRRC56	0.627	0.520	11	533874	missense variant	T/A;C;G	snv		20
rs587781525	TP53	0.689	0.480	17	7673778	missense variant	T/A;C;G	snv		20
rs764146326	TP53	0.662	0.480	17	7673779	missense variant	C/A;G;T	snv	4.0E-06	20
rs1057519991	TP53	0.662	0.440	17	7675076	missense variant	T/A;C;G	snv	4.0E-06	19
rs753660142	TP53	0.708	0.280	17	7673782	missense variant	T/C;G	snv	1.6E-05	19
rs786201059	TP53	0.701	0.360	17	7673764	stop gained	C/A;G;T	snv		19
rs121912660	TP53	0.683	0.240	17	7673781	missense variant	C/A;G;T	snv		18