Disease: Squamous cell carcinoma of the head and neck
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1057519889
EP300
0.807 0.200 22 41169525 missense variant G/A;T snv 6
rs1057519986
TP53
0.776 0.240 17 7673811 missense variant A/C;G snv 10
rs1057519987
TP53
0.776 0.280 17 7673810 missense variant A/C snv 10
rs1057519988
TP53
0.776 0.240 17 7673812 missense variant A/C;G;T snv 10
rs80338963
SMAD4
0.776 0.280 18 51065548 missense variant C/A;G;T snv 11
rs1057519896
FBXW7
0.742 0.320 4 152326136 missense variant C/A;T snv 12
rs1057520004
TP53
0.752 0.240 17 7674884 missense variant A/C;T snv 12
rs765848205
TP53
0.763 0.240 17 7674253 missense variant A/C;G;T snv 12
rs989902
PTPN13
0.742 0.240 4 86785353 missense variant T/G snv 0.42 0.53 12
rs3136038
ERCC4
0.763 0.200 16 13919522 upstream gene variant C/T snv 0.36 13
rs1057519883
CDKN2A
0.742 0.280 9 21971120 missense variant C/G;T snv 14
rs377767347
SMAD4
0.742 0.520 18 51065549 missense variant G/A;C;T snv 14
rs867384286
FBXW7
0.732 0.240 4 152328233 missense variant G/A;C snv 4.3E-06 14
rs121912655
TP53
0.724 0.400 17 7674238 missense variant C/A;G;T snv 15
rs149680468
FBXW7
0.742 0.320 4 152326137 missense variant G/A;C;T snv 15
rs375874539
TP53
0.732 0.320 17 7674237 missense variant G/A;C snv 15
rs587782664
TP53
0.742 0.320 17 7674252 missense variant C/A;G;T snv 4.0E-06 15
rs1057519983
TP53
0.724 0.360 17 7673797 missense variant A/G snv 16
rs1057519985
TP53
0.724 0.360 17 7673763 missense variant T/A;C;G snv 16
rs876659802
TP53
0.732 0.440 17 7673787 missense variant G/A;C;T snv 16
rs985033810
TP53
0.724 0.280 17 7674232 missense variant C/A;G;T snv 16
rs1057519895
FBXW7
0.724 0.240 4 152328232 missense variant C/A;G;T snv 17
rs1057519989
TP53
0.732 0.240 17 7674233 missense variant C/A;G;T snv 17
rs148924904
TP53
0.724 0.360 17 7675124 missense variant T/C snv 7.0E-06 17
rs864622237
TP53
0.716 0.320 17 7674263 missense variant A/C;G;T snv 17