DisGeNET - a database of gene-disease associations

List of shared variants

Esophageal carcinoma, C0152018

Disease: Malignant neoplasm of esophagus

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10509670	PLCE1	0.851	0.080	10	94308190	intron variant	A/G	snv		0.30	5
rs13016963	FLACC1	0.851	0.080	2	201298088	intron variant	A/G	snv		0.59	5
rs1801173	TP73	0.851	0.120	1	3682346	5 prime UTR variant	C/T	snv	0.20	0.18	5
rs2228059	LOC107984200 ; IL15RA	0.882	0.080	10	5960405	missense variant	T/G	snv	0.51	0.55	5
rs2273953	TP73	0.851	0.120	1	3682336	5 prime UTR variant	G/A;T	snv	0.20; 3.3E-04		5
rs31563		0.851	0.160	5	135899917	intron variant	C/A;T	snv			5
rs315919	IL1RN	0.851	0.120	2	113118636	intron variant	T/G	snv		0.55	5
rs3181052	IL1RN	0.851	0.120	2	113128472	intron variant	G/A	snv		0.16	5
rs4462560	NEIL1 ; MIR631 ; MAN2C1	0.851	0.080	15	75355623	3 prime UTR variant	G/C	snv		0.64	5
rs7248488	ZNF208	0.851	0.160	19	22005907	intron variant	A/C	snv		0.59	5
rs756826500	ERCC1	0.925	0.080	19	45413705	missense variant	G/A	snv	4.0E-06		5
rs10931936	CASP8	0.827	0.120	2	201279205	intron variant	T/C	snv		0.72	6
rs115510139	COL6A3	0.827	0.120	2	237331726	intron variant	A/T	snv		0.60	6
rs2236142	HSCB ; CHEK2	0.827	0.120	22	28741956	5 prime UTR variant	G/C	snv		0.66	6
rs2274224	PLCE1-AS1 ; PLCE1	0.882	0.080	10	94279840	missense variant	G/A;C	snv	8.8E-05; 0.44		6
rs1035142	FLACC1	0.807	0.200	2	201288355	3 prime UTR variant	T/C;G	snv		0.54	7
rs2107301	VDR	0.807	0.120	12	47861787	intron variant	G/A	snv		0.26	7
rs3176352	CDKN1A	0.807	0.120	6	36684562	intron variant	C/A;G;T	snv	8.0E-06; 0.37; 2.0E-05		7
rs452204	IL1RN	0.807	0.200	2	113131484	intron variant	G/A	snv		0.45	7
rs9841504	ZBTB20	0.827	0.120	3	114643917	intron variant	C/G;T	snv			7
rs1989969	VDR	0.827	0.120	12	47884227	intron variant	A/C;G;T	snv		0.60	8
rs4767364	NAA25	0.807	0.160	12	112083644	intron variant	G/A	snv		0.45	8
rs17728461	LOC105372988 ; HORMAD2	0.776	0.120	22	30202563	intron variant	C/G	snv		0.25	9
rs246079	UNG	0.790	0.120	12	109109255	intron variant	A/G;T	snv			9
rs465498	CLPTM1L	0.776	0.200	5	1325688	non coding transcript exon variant	A/G	snv		0.46	9