Disease: Inflammatory Bowel Diseases
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs653178
ATXN2
0.672 0.600 12 111569952 intron variant C/T snv 0.67 41
rs2111485 0.724 0.280 2 162254026 regulatory region variant A/G snv 0.46 17
rs4676410
GPR35
0.716 0.240 2 240624322 intron variant G/A snv 0.26 17
rs17293632
SMAD3
0.763 0.240 15 67150258 intron variant C/T snv 0.17 12
rs6740847 0.925 0.040 2 181443625 intergenic variant A/G snv 0.57 8
rs4821544
NCF4-AS1 ; NCF4
0.925 0.040 22 36862461 intron variant T/A;C snv 6
rs78487399
THADA
2 43582208 intron variant G/C snv 6.2E-02 5
rs8005161
GPR65
0.882 0.120 14 88006251 intron variant C/T snv 0.18 5