Disease: Low density lipoprotein cholesterol measurement
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs10744775
BRAP
12 111658411 intron variant T/C snv 0.44 2
rs10832027
ARNTL
11 13335636 intron variant G/A snv 0.67 5
rs11220463
ST3GAL4
11 126378316 intron variant A/T snv 0.12 3
rs12711751 2 113080188 downstream gene variant T/G snv 0.61 2
rs12721046
APOC1
19 44917997 intron variant G/A snv 0.11 8
rs2285810
HECTD4
12 112261736 non coding transcript exon variant T/C snv 0.45 2
rs340005
RORA-AS1 ; RORA
15 60585831 intron variant G/A snv 0.67 3
rs3822857
FRK
6 115992768 intron variant G/A;C snv 3
rs4703642
LOC105379040
5 74966337 intron variant A/G snv 0.50 3
rs4841132
LOC157273
8 9326086 non coding transcript exon variant A/G snv 0.89 14
rs630014
ABO
9 133274306 intron variant G/A;C snv 9
rs661955 1 234707109 upstream gene variant G/C;T snv 3
rs8180991 8 125488108 intron variant C/G snv 0.19 3
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs1260326
GCKR
0.645 0.600 2 27508073 missense variant T/C;G snv 0.63; 4.0E-06 0.68 81
rs11887534
ABCG5 ; ABCG8
0.653 0.440 2 43839108 missense variant G/A;C snv 6.4E-06; 6.7E-02 29
rs780094
GCKR
0.658 0.400 2 27518370 intron variant T/C snv 0.67 62
rs2075650
TOMM40
0.662 0.360 19 44892362 intron variant A/G snv 0.13 0.13 45
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs4420638
APOC1
0.708 0.520 19 44919689 downstream gene variant A/G snv 0.18 43
rs579459 0.752 0.320 9 133278724 upstream gene variant C/T snv 0.81 28
rs646776
CELSR2
0.752 0.240 1 109275908 downstream gene variant C/T snv 0.74 25
rs780093
GCKR
0.763 0.240 2 27519736 intron variant T/C snv 0.68 30
rs10401969
SUGP1
0.776 0.240 19 19296909 intron variant T/C snv 0.10 25
rs1169288
HNF1A-AS1 ; HNF1A
0.776 0.160 12 120978847 missense variant A/C;T snv 0.35 21