DisGeNET - a database of gene-disease associations

List of shared variants

Low density lipoprotein cholesterol measurement, C0202117

Disease: Diabetes Mellitus, Non-Insulin-Dependent

Source: ALL

Results per page

Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs10401969	SUGP1	0.776	0.240	19	19296909	intron variant	T/C	snv		0.10	25
rs10455872	LPA	0.662	0.320	6	160589086	intron variant	A/G	snv		4.3E-02	33
rs11048456	LOC105369705	1.000	0.080	12	26310149	intron variant	C/T	snv		0.62	6
rs1128249	COBLL1	1.000	0.080	2	164672114	intron variant	G/C;T	snv			10
rs11591147	PCSK9	0.677	0.360	1	55039974	missense variant	G/A;T	snv	1.2E-02		28
rs1169288	HNF1A-AS1 ; HNF1A	0.776	0.160	12	120978847	missense variant	A/C;T	snv	0.35		21
rs1183910	HNF1A	1.000	0.080	12	120983004	intron variant	G/A	snv		0.28	5
rs12208357	SLC22A1	1.000	0.080	6	160122116	missense variant	C/T	snv	5.2E-02	4.9E-02	5
rs1260326	GCKR	0.645	0.600	2	27508073	missense variant	T/C;G	snv	0.63; 4.0E-06	0.68	81
rs12916	HMGCR ; CERT1	0.807	0.240	5	75360714	3 prime UTR variant	T/C;G	snv		0.37	12
rs12980275		0.701	0.360	19	39241143	upstream gene variant	A/G	snv		0.36	23
rs17238484	HMGCR	1.000	0.080	5	75352671	intron variant	G/T	snv		0.22	4
rs174550	FADS1 ; FADS2	0.925	0.160	11	61804006	5 prime UTR variant	T/C	snv		0.28	13
rs174583	FADS2	0.807	0.320	11	61842278	intron variant	C/T	snv		0.35	16
rs1800562	LOC108783645 ; HFE	0.435	0.880	6	26092913	missense variant	G/A	snv	3.3E-02	3.8E-02	262
rs1800961	HNF4A	0.851	0.160	20	44413724	missense variant	C/T	snv	3.1E-02	2.5E-02	21
rs2000999	HPR ; TXNL4B	1.000	0.080	16	72074194	intron variant	G/A	snv		0.16	7
rs2075290	ZPR1	0.882	0.160	11	116782580	intron variant	C/G;T	snv			10
rs2278426	ANGPTL8 ; DOCK6	1.000	0.080	19	11239812	missense variant	C/T	snv	0.11	0.11	11
rs2297374	SLC22A1	1.000	0.080	6	160154953	intron variant	C/T	snv	0.37	0.42	3
rs3184504	SH2B3 ; ATXN2	0.572	0.600	12	111446804	missense variant	T/A;C;G	snv	0.67		92
rs3764261		0.732	0.280	16	56959412	upstream gene variant	C/A	snv		0.31	26
rs3794991	GATAD2A	1.000	0.080	19	19499787	intron variant	C/G;T	snv		7.4E-02	5
rs3817588	GCKR	0.882	0.160	2	27508345	intron variant	T/C	snv		0.14	7
rs405509	APOE	0.667	0.480	19	44905579	upstream gene variant	T/G	snv		0.58	30