DisGeNET - a database of gene-disease associations

List of shared variants

Phospholipid measurement, C0202177

Disease: Serum HDL cholesterol measurement

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs964184	ZPR1	0.716	0.440	11	116778201	3 prime UTR variant	G/C	snv		0.82	47
rs174547	FADS2 ; FADS1	0.742	0.240	11	61803311	intron variant	T/C	snv		0.28	33
rs1535	FADS2	0.752	0.240	11	61830500	intron variant	A/G	snv		0.31	24
rs174535	MYRF ; TMEM258	0.776	0.280	11	61783884	missense variant	T/A;C;G	snv	0.38	0.32	19
rs102275	TMEM258	0.827	0.320	11	61790331	non coding transcript exon variant	T/C	snv		0.47	18
rs174548	FADS2 ; FADS1	0.851	0.160	11	61803876	5 prime UTR variant	C/G;T	snv			17
rs10468017	ALDH1A2	0.851	0.120	15	58386313	intron variant	C/T	snv		0.24	12
rs174570	FADS2	0.882	0.200	11	61829740	intron variant	C/T	snv		0.15	11
rs4775041	ALDH1A2	1.000	0.040	15	58382496	intron variant	G/C	snv		0.24	8