Disease: Serum HDL cholesterol measurement
Source: INFERRED ×
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs8071787
GAS7
17 10058819 intron variant T/C snv 4.8E-02 5
rs11571151
PGR-AS1 ; PGR
11 101127486 missense variant C/G;T snv 6
rs5742626
LINC02456 ; IGF1
12 102464131 intron variant T/C snv 2.3E-02 3
rs2075847
WTAPP1 ; MMP1
11 102799093 intron variant A/C;G snv 3
rs11828157
MMP13
11 102947395 intron variant G/A snv 4.7E-02 5
rs11824953
MMP13
11 102949239 intron variant C/G snv 2.7E-02 3
rs675504 11 102959002 upstream gene variant A/G snv 0.98 5
rs34400162
GSTO2
10 104275312 missense variant G/A snv 5.6E-04 1.7E-03 3
rs12686004
ABCA1
1.000 0.040 9 104891145 intron variant G/A snv 9.1E-02 6
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 10
rs2575876
ABCA1
9 104903458 intron variant G/A snv 0.24 7
rs480392
NTNG1
1 107436774 synonymous variant A/C snv 0.99 0.95 3
rs4970834
CELSR2
0.925 0.160 1 109272258 intron variant C/T snv 0.17 0.21 6
rs629301
CELSR2
0.851 0.120 1 109275684 3 prime UTR variant G/T snv 0.74 22
rs7998875
COL4A1
13 110289053 intron variant G/A;T snv 3
rs2278426
ANGPTL8 ; DOCK6
1.000 0.080 19 11239812 missense variant C/T snv 0.11 0.11 6
rs3093267
F7
13 113118661 missense variant G/A;T snv 8.0E-05 6
rs17237820
AGTR2
X 116174483 3 prime UTR variant A/T snv 5.7E-03 3
rs499790
LINC02702
11 116649022 intron variant C/T snv 8.6E-02 4
rs480823
LINC02702
11 116655013 intron variant T/C snv 7.3E-02 4
rs481843
LINC02702
1.000 0.040 11 116655150 non coding transcript exon variant C/T snv 8.8E-02 5
rs486394
LINC02702
1.000 0.040 11 116655605 intron variant A/C;T snv 4
rs4938303 11 116714271 intergenic variant C/A;T snv 0.62 5
rs2000571 11 116714817 regulatory region variant A/G snv 0.73 3
rs9326246 0.925 0.040 11 116741017 intergenic variant C/G snv 0.93 9