Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs2476601
AP4B1-AS1 ; PTPN22
0.498 0.800 1 113834946 missense variant A/G snv 0.93 0.93 121
rs1800872
IL19 ; IL10
0.495 0.840 1 206773062 5 prime UTR variant T/G snv 0.69 119
rs231775
CTLA4
0.504 0.720 2 203867991 missense variant A/G;T snv 0.42; 4.0E-06 115
rs1800871
IL19 ; IL10
0.508 0.800 1 206773289 5 prime UTR variant A/G snv 0.69 108
rs3184504
SH2B3 ; ATXN2
0.572 0.600 12 111446804 missense variant T/A;C;G snv 0.67 92
rs7574865
STAT4
0.574 0.720 2 191099907 intron variant T/G snv 0.79 59
rs1799724
LTA ; TNF
0.600 0.680 6 31574705 upstream gene variant C/T snv 8.5E-02 47
rs755622
MIF-AS1 ; MIF
0.611 0.720 22 23894205 intron variant G/C snv 0.26 44
rs2069762
IL2
0.672 0.560 4 122456825 upstream gene variant A/C snv 0.24 23
rs2187668
LOC107986589 ; HLA-DQA2 ; HLA-DQA1
0.701 0.480 6 32638107 intron variant C/T snv 3.3E-03 20
rs7708392
TNIP1
0.732 0.400 5 151077924 intron variant G/C snv 0.44 13
rs5844572
MIF ; MIF-AS1
0.752 0.360 22 23893562 intron variant -/ATTC delins 11
rs739496
SH2B3 ; ATXN2
0.790 0.160 12 111449855 3 prime UTR variant A/G snv 0.27 10
rs7582694
STAT4
0.763 0.400 2 191105394 intron variant C/G snv 0.77 9
rs9277534
HLA-DPB1
0.790 0.280 6 33087030 3 prime UTR variant A/G snv 0.38 7
rs121434254
AIRE
0.807 0.200 21 44289773 stop gained C/A;T snv 7.5E-04 6
rs2069763
IL2
0.807 0.320 4 122456327 synonymous variant C/A snv 0.36 0.29 6
rs3891175
HLA-DQB1
0.851 0.160 6 32666690 5 prime UTR variant C/T snv 0.20 5
rs11065904
SH2B3 ; ATXN2
0.882 0.080 12 111449163 3 prime UTR variant T/A snv 3.2E-02 4
rs2238154
SH2B3 ; ATXN2
0.882 0.080 12 111444681 intron variant C/A;G snv 4
rs6000782 0.925 0.080 22 37532179 intergenic variant A/C snv 0.15 2
rs4325730
LOC101927840
0.925 0.080 2 203933067 upstream gene variant G/A;T snv 2
rs2488458
PTPN22 ; AP4B1-AS1
0.925 0.080 1 113863829 intron variant T/A;C snv 2