DisGeNET - a database of gene-disease associations

List of shared variants

Malignant neoplasm of lung, C0242379

Disease: Conventional (Clear Cell) Renal Cell Carcinoma

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF GENOME	Num. diseases
rs10069690	TERT	0.595	0.560	5	1279675	intron variant	C/T	snv	0.36	53
rs1057520001	TP53	0.677	0.360	17	7674886	missense variant	A/C;G	snv		23
rs1131691014	TP53	0.439	0.800	17	7676154	frameshift variant	-/C	ins		214
rs1143623	IL1B	0.677	0.440	2	112838252	upstream gene variant	C/G	snv	0.24	29
rs121913377	BRAF	0.354	0.840	7	140753335	missense variant	CA/AT;TT	mnv		480
rs121913530	KRAS	0.583	0.640	12	25245351	missense variant	C/A;G;T	snv		63
rs1222213359	VEGFA	0.574	0.720	6	43770966	missense variant	G/A	snv		62
rs132770	DESI1 ; XRCC6	0.752	0.320	22	41621260	5 prime UTR variant	A/G	snv	0.83	14
rs132774	XRCC6	0.776	0.280	22	41635949	intron variant	C/G	snv	0.69	9
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv		78
rs1760944	OSGEP ; APEX1	0.672	0.480	14	20454990	non coding transcript exon variant	T/C;G	snv		26
rs1800872	IL19 ; IL10	0.495	0.840	1	206773062	5 prime UTR variant	T/G	snv	0.69	119
rs1800896	IL19 ; IL10	0.507	0.800	1	206773552	intron variant	T/C	snv	0.41	113
rs2227284	IL4	0.732	0.480	5	132677033	intron variant	T/C;G	snv		12
rs2243250	IL4	0.570	0.760	5	132673462	upstream gene variant	C/T	snv	0.35	61
rs2267437	DESI1 ; XRCC6	0.724	0.320	22	41620695	intron variant	C/A;G	snv		19
rs2736100	TERT	0.550	0.880	5	1286401	3 prime UTR variant	C/A	snv	0.52	83
rs28362491	LOC105377621 ; NFKB1	0.592	0.720	4	102500998	non coding transcript exon variant	ATTG/-	delins		56
rs3021097	IL10 ; IL19	0.752	0.440	1	206773289	5 prime UTR variant	A/G	snv		10
rs390802	DNAH1	0.827	0.160	3	52397655	intron variant	G/A	snv	0.16	5
rs397507444	MTHFR	0.405	0.880	1	11794407	missense variant	T/G	snv		306
rs5751129	XRCC6 ; DESI1	0.752	0.320	22	41619761	intron variant	C/T	snv	0.69	14
rs6721961	NFE2L2	0.672	0.520	2	177265309	intron variant	T/C;G	snv	0.89	24
rs699947	VEGFA	0.570	0.680	6	43768652	upstream gene variant	A/C;T	snv		67
rs878854066	TP53	0.439	0.800	17	7676153	missense variant	GG/AC	mnv		213