Disease: Metabolic Syndrome X
Source: ALL
Variant Gene DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Num. diseases
rs1799983
NOS3
0.430 0.880 7 150999023 missense variant T/A;G snv 0.75 246
rs4986790
TLR4
0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 223
rs2910164
MIR3142HG ; MIR146A
0.447 0.880 5 160485411 mature miRNA variant C/G snv 0.71; 4.1E-06 0.70 193
rs1801133
MTHFR
0.472 0.880 1 11796321 missense variant G/A snv 0.31 0.27 174
rs1800629
TNF
0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 169
rs662
PON1
0.485 0.840 7 95308134 missense variant T/C snv 0.38 0.42 157
rs4880
SOD2
0.500 0.840 6 159692840 missense variant A/G snv 0.48 0.47 131
rs2010963
VEGFA
0.542 0.840 6 43770613 5 prime UTR variant C/G snv 0.68 82
rs429358
APOE
0.590 0.600 19 44908684 missense variant T/C snv 0.14 0.16 66
rs7041
GC
0.576 0.800 4 71752617 missense variant A/C;T snv 0.52; 4.0E-06 64
rs7412
APOE
0.641 0.640 19 44908822 missense variant C/T snv 6.2E-02 7.9E-02 47
rs1205
CRP
0.602 0.680 1 159712443 3 prime UTR variant C/T snv 0.30 46
rs10757278
CDKN2B-AS1
0.620 0.520 9 22124478 intron variant A/G snv 0.40 44
rs1800625
AGER ; PBX2
0.641 0.680 6 32184665 upstream gene variant A/G snv 0.15 39
rs5882
CETP
0.649 0.400 16 56982180 missense variant G/A;C snv 0.62 35
rs1800624
PBX2 ; AGER
0.658 0.480 6 32184610 upstream gene variant A/G;T snv 33
rs405509
APOE
0.667 0.480 19 44905579 upstream gene variant T/G snv 0.58 30
rs3764261 0.732 0.280 16 56959412 upstream gene variant C/A snv 0.31 26
rs708272
CETP
0.708 0.440 16 56962376 intron variant G/A snv 0.42 0.38 24
rs822396
ADIPOQ
0.732 0.400 3 186849088 intron variant G/A snv 0.81 16
rs1883025
ABCA1
0.807 0.120 9 104902020 intron variant C/T snv 0.28 13
rs10468017
ALDH1A2
0.851 0.120 15 58386313 intron variant C/T snv 0.24 12
rs1864163
CETP
0.882 0.120 16 56963321 intron variant G/A snv 0.26 10
rs2043085
ALDH1A2
0.827 0.080 15 58388755 intron variant T/C snv 0.54 9
rs2250656
C3
0.882 0.160 19 6718523 intron variant T/C snv 0.25 4