DisGeNET - a database of gene-disease associations

List of shared variants

Parkinsonian Disorders, C0242422

Disease: Parkinson Disease

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs367543041	TARDBP	0.742	0.200	1	11022553	missense variant	G/A;C	snv	3.0E-05		15
rs1224426272	CIT	0.925	0.040	12	119869138	missense variant	C/T	snv			6
rs12817488	CCDC62	1.000	0.040	12	122811747	intron variant	G/A	snv		0.39	3
rs387907571	DNAJC13	0.827	0.080	3	132477995	missense variant	A/G	snv	4.2E-06	3.5E-05	6
rs421016	GBA	0.683	0.440	1	155235252	missense variant	A/C;G	snv	8.0E-06; 1.3E-03		30
rs76763715	GBA	0.658	0.520	1	155235843	missense variant	T/C;G	snv	2.3E-03		35
rs1289324472	GBA	0.716	0.400	1	155236354	missense variant	T/C	snv		1.4E-05	21
rs2230288	GBA	0.776	0.160	1	155236376	missense variant	C/T	snv	1.0E-02	1.0E-02	18
rs368134308	PRKN	0.882	0.040	6	162443356	missense variant	C/A;G;T	snv	3.2E-05; 2.6E-04		4
rs2421947	DNM3-IT1 ; DNM3	1.000	0.040	1	171863954	intron variant	C/G;T	snv			2
rs112176450	EIF4G1	0.807	0.080	3	184327401	missense variant	G/A;T	snv	2.1E-04	2.8E-04	7
rs74315356	PINK1-AS ; PINK1	0.925	0.040	1	20649054	stop gained	G/A	snv	4.0E-06	1.4E-05	3
rs45539432	PINK1-AS ; PINK1	0.851	0.040	1	20649109	stop gained	C/T	snv	4.0E-05	3.5E-05	5
rs121917763	TH	0.925	0.040	11	2167896	missense variant	A/G	snv	1.2E-05	7.0E-06	5
rs121918304	FBXO7	0.925	0.080	22	32498453	stop gained	C/A;T	snv	4.0E-06; 4.0E-06		4
rs33939927	LRRK2	0.708	0.120	12	40310434	missense variant	C/A;G;T	snv	4.0E-06; 1.2E-05		24
rs34995376	LRRK2	0.807	0.080	12	40310435	missense variant	G/A	snv		7.0E-06	7
rs111501952	LRRK2	1.000	0.040	12	40310461	missense variant	G/A	snv	4.4E-05	7.7E-05	2
rs35801418	LRRK2	0.827	0.120	12	40321114	missense variant	A/G	snv			7
rs34015634	LRRK2	0.851	0.120	12	40340380	missense variant	T/C	snv	3.2E-05	1.4E-05	8
rs34637584	LRRK2	0.583	0.480	12	40340400	missense variant	G/A	snv	5.3E-04	3.6E-04	78
rs34778348	LRRK2 ; LOC105369736	0.742	0.120	12	40363526	missense variant	G/A	snv	1.7E-03	5.8E-04	15
rs1239756674	MAOA	1.000	0.040	X	43743818	synonymous variant	G/A	snv			2
rs2942168	LINC02210-CRHR1 ; LINC02210	0.925	0.120	17	45637484	non coding transcript exon variant	G/A;C;T	snv		0.14	4
rs762472005	SACM1L	0.851	0.040	3	45722873	missense variant	G/A	snv	1.2E-05	7.0E-06	5